RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1195374" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1195374 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13074918 13074918 PRJNA1195374_P_NODE_27031_length_436_cov_4.082645_g26687_i0 PRJNA1195374 27031 436 4.082645 17.8003322 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 227 1.6999999999999995e-73   NR MBX9724270.1 2364082 g26687 i0 94 0.805045871559633 117 7 80.5 0 435 85 54 170 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 351 227 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
14350936 14350936 PRJNA1195374_P_NODE_56352_length_289_cov_1.425926_g56008_i0 PRJNA1195374 56352 289 1.425926 4.12092614 Bacteria 2 Bacteria Bacteria 164 8.8e-49   NR PKL76865.1 2013813 g56008 i0 84.2 4.9204152249135 95 15 98.6 0 3 287 52 146 PKL76865.1 MAG: ATP-dependent Clp protease proteolytic subunit [Candidatus Melainabacteria bacterium HGW-Melainabacteria-1] diamond 1422 165 0.993939393939394 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium HGW-Melainabacteria-1
26755730 26755730 PRJNA1195374_P_NODE_81681_length_243_cov_1.358824_g81337_i0 PRJNA1195374 81681 243 1.358824 3.30194232 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 89.7 4.33e-20   NR MBI5172228.1 2052166 g81337 i0 51.3 0.987654320987654 80 39 98.8 0 3 242 98 177 MBI5172228.1 C40 family peptidase [Candidatus Melainabacteria bacterium] diamond 240 89.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;