contig_metadata
16 rows where bioproject = "PRJNA1195374" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1596195 | 1596195 | PRJNA1195374_P_NODE_38762_length_360_cov_0.972125_g38418_i0 | PRJNA1195374 | 38762 | 360 | 0.972125 | 3.49965 | Deinococcus ficus | 317577 | Bacteria | Bacteria | 590 | 5.849999999999998e-164 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g38418 | i0 | 98.225 | 362.561111111111 | 338 | 4 | 94 | 2 | 2 | 338 | 2341734 | 2342070 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 130522 | 590 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 6699280 | 6699280 | PRJNA1195374_P_NODE_32626_length_395_cov_1.434783_g32282_i0 | PRJNA1195374 | 32626 | 395 | 1.434783 | 5.66739285 | Deinococcus metallilatus | 1211322 | Bacteria | Bacteria | 52.8 | 0.038 | NTclustered | gi|1609451317|gb|CP038512.1| | 1211322 | g32282 | i0 | 100 | 0.0708860759493671 | 28 | 0 | 7 | 0 | 81 | 108 | 2220095 | 2220068 | Deinococcus metallilatus strain MA1002 chromosome | blastn | 28 | 52.8 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus metallilatus | ||
| 8695991 | 8695991 | PRJNA1195374_P_NODE_8407_length_754_cov_1.602056_g8099_i0 | PRJNA1195374 | 8407 | 754 | 1.602056 | 12.07950224 | Deinococcus | 1298 | Bacteria | Bacteria | 56.5 | 0.006 | NTclustered | gi|1735477873|gb|CP031501.1| | 1299 | g8099 | i0 | 100 | 0.635278514588859 | 30 | 0 | 4 | 0 | 209 | 238 | 236605 | 236576 | Deinococcus radiodurans strain R1 dM1 chromosome II, complete sequence | blastn | 479 | 56.5 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 9971033 | 9971033 | PRJNA1195374_P_NODE_6888_length_818_cov_2.464430_g6592_i0 | PRJNA1195374 | 6888 | 818 | 2.46443 | 20.1590374 | root | 1 | Root_unresolved | Root_unresolved | 299 | 1.37e-98 | NR | WP_291426924.1 | 47478 | g6592 | i0 | 64.9 | 23.6772616136919 | 248 | 86 | 90.6 | 1 | 40 | 780 | 5 | 252 | WP_291426924.1 3-hydroxyacyl-CoA dehydrogenase [Deinococcus sp.] | diamond | 19368 | 301 | 0.993355481727575 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 10525044 | 10525044 | PRJNA1195374_P_NODE_27909_length_429_cov_2.323034_g27565_i0 | PRJNA1195374 | 27909 | 429 | 2.323034 | 9.96581586 | Thermus oshimai | 56957 | Bacteria | Bacteria | 56.5 | 0.003 | NTclustered | gi|2894814231|gb|CP178485.1| | 56957 | g27565 | i0 | 97.059 | 0.144522144522145 | 34 | 0 | 8 | 1 | 127 | 159 | 750517 | 750484 | Thermus oshimai strain Blanco chromosome, complete genome | blastn | 62 | 56.5 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus oshimai | ||
| 19448286 | 19448286 | PRJNA1195374_P_NODE_74696_length_248_cov_1.760000_g74352_i0 | PRJNA1195374 | 74696 | 248 | 1.76 | 4.3648 | Deinococcus actinosclerus | 1768108 | Bacteria | Bacteria | 174 | 4.59e-39 | NTclustered | gi|972944657|gb|CP013910.1| | 1768108 | g74352 | i0 | 81.481 | 59.6572580645161 | 216 | 36 | 86 | 4 | 18 | 231 | 2204291 | 2204078 | Deinococcus actinosclerus strain BM2 chromosome, complete genome | blastn | 14795 | 174 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus actinosclerus | ||
| 20169226 | 20169226 | PRJNA1195374_P_NODE_7756_length_780_cov_1.521924_g7450_i0 | PRJNA1195374 | 7756 | 780 | 1.521924 | 11.8710072 | Bacteria | 2 | Bacteria | Bacteria | 295 | 3.93e-97 | NR | WP_303102018.1 | 47478 | g7450 | i0 | 65 | 41.3346153846154 | 243 | 84 | 93.1 | 1 | 3 | 728 | 10 | 252 | WP_303102018.1 3-hydroxyacyl-CoA dehydrogenase [Deinococcus sp.] | diamond | 32241 | 295 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 21444733 | 21444733 | PRJNA1195374_P_NODE_51657_length_305_cov_1.099138_g51313_i0 | PRJNA1195374 | 51657 | 305 | 1.099138 | 3.3523709 | Deinococcus | 1298 | Bacteria | Bacteria | 553 | 6.39e-153 | NTclustered | gi|1219686863|gb|MF524660.1| | 47478 | g51313 | i0 | 99.344 | 103.373770491803 | 305 | 2 | 100 | 0 | 1 | 305 | 75 | 379 | Deinococcus sp. strain MadaFrogSkinBac.DB-.3438 16S ribosomal RNA gene, partial sequence | blastn | 31529 | 553 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 23994915 | 23994915 | PRJNA1195374_P_NODE_51279_length_306_cov_1.622318_g50935_i0 | PRJNA1195374 | 51279 | 306 | 1.622318 | 4.96429308 | Bacteria | 2 | Bacteria | Bacteria | 174 | 3.36e-48 | NR | 1TAQ_A | 271 | g50935 | i0 | 98.9 | 2.73529411764706 | 93 | 1 | 91.2 | 0 | 306 | 28 | 740 | 832 | 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] | diamond | 837 | 174 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus aquaticus | ||
| 23994984 | 23994984 | PRJNA1195374_P_NODE_59699_length_281_cov_0.826923_g59355_i0 | PRJNA1195374 | 59699 | 281 | 0.826923 | 2.32365363 | Thermus | 270 | Bacteria | Bacteria | 52.8 | 0.026 | NTclustered | gi|320149275|gb|CP001962.1| | 743525 | g59355 | i0 | 100 | 0.298932384341637 | 28 | 0 | 10 | 0 | 71 | 98 | 2011805 | 2011832 | Thermus scotoductus SA-01, complete genome | blastn | 84 | 52.8 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus scotoductus | ||
| 26711278 | 26711278 | PRJNA1195374_P_NODE_69261_length_255_cov_1.269231_g68917_i0 | PRJNA1195374 | 69261 | 255 | 1.269231 | 3.23653905 | root | 1 | Root_unresolved | Root_unresolved | 161 | 5.65e-44 | NR | 1TAQ_A | 271 | g68917 | i0 | 97.6 | 3.95294117647059 | 84 | 2 | 98.8 | 0 | 2 | 253 | 465 | 548 | 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] | diamond | 1008 | 161 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus aquaticus | ||
| 27312916 | 27312916 | PRJNA1195374_P_NODE_60543_length_278_cov_1.502439_g60199_i0 | PRJNA1195374 | 60543 | 278 | 1.502439 | 4.17678042 | root | 1 | Root_unresolved | Root_unresolved | 177 | 1.72e-49 | NR | 1TAQ_A | 271 | g60199 | i0 | 100 | 5.9568345323741 | 92 | 0 | 99.3 | 0 | 2 | 277 | 387 | 478 | 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] | diamond | 1656 | 177 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus aquaticus | ||
| 27483198 | 27483198 | PRJNA1195374_P_NODE_17243_length_545_cov_1.864407_g16901_i0 | PRJNA1195374 | 17243 | 545 | 1.864407 | 10.16101815 | Thermosipho melanesiensis | 46541 | Bacteria | Bacteria | 124 | 4.27e-31 | NR | WP_012057074.1 | 46541 | g16901 | i0 | 47.6 | 9.35229357798165 | 124 | 63 | 68.3 | 2 | 170 | 541 | 4 | 125 | WP_012057074.1 purine-nucleoside phosphorylase [Thermosipho melanesiensis] | diamond | 5097 | 124 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Thermosipho | Thermosipho melanesiensis | ||
| 27944306 | 27944306 | PRJNA1195374_P_NODE_65205_length_266_cov_1.196891_g64861_i0 | PRJNA1195374 | 65205 | 266 | 1.196891 | 3.18373006 | Bacteria | 2 | Bacteria | Bacteria | 178 | 7.68e-50 | NR | 1TAQ_A | 271 | g64861 | i0 | 100 | 4.96240601503759 | 88 | 0 | 99.2 | 0 | 264 | 1 | 615 | 702 | 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] | diamond | 1320 | 178 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus aquaticus | ||
| 30407702 | 30407702 | PRJNA1195374_P_NODE_54233_length_296_cov_0.946188_g53889_i0 | PRJNA1195374 | 54233 | 296 | 0.946188 | 2.80071648 | Bacteria | 2 | Bacteria | Bacteria | 73.2 | 1.44e-12 | NR | WP_072757930.1 | 44754 | g53889 | i0 | 46.3 | 4.48986486486486 | 95 | 48 | 95.3 | 3 | 4 | 285 | 966 | 1058 | WP_072757930.1 cellobiose phosphorylase [Fervidobacterium gondwanense] | diamond | 1329 | 73.6 | 0.994565217391304 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Fervidobacterium | Fervidobacterium gondwanense | ||
| 31545290 | 31545290 | PRJNA1195374_P_NODE_43156_length_338_cov_1.947170_g42812_i0 | PRJNA1195374 | 43156 | 338 | 1.94717 | 6.5814346 | Bacteria | 2 | Bacteria | Bacteria | 233 | 8.48e-70 | NR | 1TAQ_A | 271 | g42812 | i0 | 100 | 3.96745562130178 | 112 | 0 | 99.4 | 0 | 2 | 337 | 100 | 211 | 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] | diamond | 1341 | 233 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus aquaticus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;