RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1195374" and tax_kingdom = "Promethearchaeati"

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tax_superkingdom 1

tax_kingdom 1

  • Promethearchaeati · 3 ✖

bioproject 1

  • PRJNA1195374 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28493714 28493714 PRJNA1195374_P_NODE_83827_length_242_cov_0.911243_g83483_i0 PRJNA1195374 83827 242 0.911243 2.20520806 Promethearchaeia archaeon 3067280 Archaea Archaea 48.1 4.61e-4   NR MFB0561053.1 3067280 g83483 i0 38.9 0.892561983471074 72 32 81.8 4 39 236 637 702 MFB0561053.1 CDC48 family AAA ATPase [Promethearchaeia archaeon] diamond 216 48.1 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
29535476 29535476 PRJNA1195374_P_NODE_14150_length_599_cov_1.425856_g13812_i0 PRJNA1195374 14150 599 1.425856 8.54087744 Candidatus Heimdallarchaeota archaeon LC_2 1841597 Archaea Archaea 51.6 6.21e-4   NR OLS19807.1 1841597 g13812 i0 29 0.776293823038397 155 87 77.1 6 589 128 73 205 OLS19807.1 MAG: ABC transporter arginine-binding protein precursor [Candidatus Heimdallarchaeota archaeon LC_2] diamond 465 51.6 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon LC_2
31052151 31052151 PRJNA1195374_P_NODE_64195_length_268_cov_2.369231_g63851_i0 PRJNA1195374 64195 268 2.369231 6.34953908 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 59.3 2.04e-8   NR TFG98661.1 2053491 g63851 i0 40.7 1.01865671641791 91 52 99.6 2 268 2 18 108 TFG98661.1 MAG: hypothetical protein E4H12_05460 [Candidatus Thorarchaeota archaeon] diamond 273 59.3 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;