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contig_metadata

34 rows where bioproject = "PRJNA1195374" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 34 ✖

bioproject 1

  • PRJNA1195374 · 34 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5425455 5425455 PRJNA1195374_P_NODE_7625_length_785_cov_2.651685_g7320_i0 PRJNA1195374 7625 785 2.651685 20.81572725 Haloprofundus sp. MHR1 2572921 Archaea Archaea 54.7 0.022   NTclustered gi|1633225932|gb|CP039833.1| 2572921 g7320 i0 100 0.0369426751592357 29 0 4 0 332 360 732318 732346 Haloprofundus sp. MHR1 chromosome, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloprofundus Haloprofundus sp. MHR1
14351072 14351072 PRJNA1195374_P_NODE_64012_length_269_cov_1.275510_g63668_i0 PRJNA1195374 64012 269 1.27551 3.4311219 Salinarchaeum sp. IM2453 2862870 Archaea Archaea 52.8 0.025   NTclustered gi|2082835402|gb|CP081183.1| 2862870 g63668 i0 100 0.104089219330855 28 0 10 0 25 52 865025 864998 Salinarchaeum sp. IM2453 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronoarchaeaceae Salinarchaeum Salinarchaeum sp. IM2453
15624669 15624669 PRJNA1195374_P_NODE_55813_length_290_cov_2.829493_g55469_i0 PRJNA1195374 55813 290 2.829493 8.2055297 Halarchaeum sp. CBA1220 1853682 Archaea Archaea 52.8 0.027   NTclustered gi|1864271124|gb|CP054708.1| 1853682 g55469 i0 100 0.096551724137931 28 0 10 0 8 35 164265 164292 Halarchaeum sp. CBA1220 plasmid pCBA1220-01, complete sequence blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halarchaeum Halarchaeum sp. CBA1220
16345361 16345361 PRJNA1195374_P_NODE_59133_length_282_cov_1.110048_g58789_i0 PRJNA1195374 59133 282 1.110048 3.13033536 Methanosarcinales archaeon 2250255 Archaea Archaea 142 8.41e-40   NR RYE83291.1 2250255 g58789 i0 69.6 0.978723404255319 92 28 97.9 0 282 7 59 150 RYE83291.1 MAG: hypothetical protein EOO65_04195, partial [Methanosarcinales archaeon] diamond 276 142 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
18174012 18174012 PRJNA1195374_P_NODE_80715_length_244_cov_0.900585_g80371_i0 PRJNA1195374 80715 244 0.900585 2.1974274 Halobacterium wangiae 2902623 Archaea Archaea 52.8 0.022   NTclustered gi|2168769890|gb|CP089588.1| 2902623 g80371 i0 100 0.114754098360656 28 0 11 0 131 158 1095669 1095642 Halobacterium wangiae strain Gai3-17 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium wangiae
23274097 23274097 PRJNA1195374_P_NODE_56399_length_289_cov_1.402778_g56055_i0 PRJNA1195374 56399 289 1.402778 4.05402842 Methanobacteriota archaeon 2026739 Archaea Archaea 153 5.839999999999999e-45   NR RYE95218.1 2026739 g56055 i0 78.7 0.923875432525952 89 19 92.4 0 269 3 2 90 RYE95218.1 MAG: enoyl-CoA hydratase/isomerase family protein, partial [Methanobacteriota archaeon] diamond 267 153 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
23274491 23274491 PRJNA1195374_P_NODE_76259_length_247_cov_1.298851_g75915_i0 PRJNA1195374 76259 247 1.298851 3.20816197 Methanosarcinales archaeon 2250255 Archaea Archaea 70.5 6.63e-14   NR RYE82218.1 2250255 g75915 i0 62.3 0.643724696356275 53 20 64.4 0 87 245 1 53 RYE82218.1 MAG: hypothetical protein EOO65_05795, partial [Methanosarcinales archaeon] diamond 159 70.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
26819444 26819444 PRJNA1195374_P_NODE_65421_length_265_cov_1.583333_g65077_i0 PRJNA1195374 65421 265 1.583333 4.19583245 Candidatus Methanoplasma termitum 1577791 Archaea Archaea 60.8 1.77e-8   NR WP_048112063.1 1577791 g65077 i0 49.3 0.80377358490566 71 32 77 2 260 57 172 241 WP_048112063.1 pirin family protein [Candidatus Methanoplasma termitum] diamond 213 60.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Candidatus Methanoplasma Candidatus Methanoplasma termitum
26977463 26977463 PRJNA1195374_P_NODE_39022_length_358_cov_1.494737_g38678_i0 PRJNA1195374 39022 358 1.494737 5.35115846 Methanosarcinales archaeon 2250255 Archaea Archaea 82.4 3.48e-17   NR RYE82726.1 2250255 g38678 i0 46.1 0.745810055865922 89 48 74.6 0 39 305 31 119 RYE82726.1 MAG: hypothetical protein EOO65_05065 [Methanosarcinales archaeon] diamond 267 82.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
27577893 27577893 PRJNA1195374_P_NODE_16344_length_560_cov_0.919918_g16002_i0 PRJNA1195374 16344 560 0.919918 5.1515408 Methanosarcinales archaeon 2250255 Archaea Archaea 135 2.93e-36   NR RYE82689.1 2250255 g16002 i0 53.6 0.589285714285714 110 51 58.9 0 231 560 52 161 RYE82689.1 MAG: DUF393 domain-containing protein [Methanosarcinales archaeon] diamond 330 135 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
27956886 27956886 PRJNA1195374_P_NODE_58925_length_282_cov_2.162679_g58581_i0 PRJNA1195374 58925 282 2.162679 6.09875478 Methanosarcinales archaeon 2250255 Archaea Archaea 150 2.2199999999999998e-42   NR RYE83664.1 2250255 g58581 i0 79.3 0.925531914893617 87 18 92.6 0 20 280 86 172 RYE83664.1 MAG: Bardet-Biedl syndrome 5 protein, partial [Methanosarcinales archaeon] diamond 261 150 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
28070482 28070482 PRJNA1195374_P_NODE_22845_length_475_cov_1.967662_g22501_i0 PRJNA1195374 22845 475 1.967662 9.3463945 Halobacteriales 2235 Archaea Archaea 45.4 0.0309   NR WP_390223287.1 1748331 g22501 i0 25 1.40210526315789 124 90 77.7 3 39 407 116 237 WP_390223287.1 RIO1 family regulatory kinase/ATPase [Haloferax namakaokahaiae] diamond 666 45.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax namakaokahaiae
28525288 28525288 PRJNA1195374_P_NODE_13727_length_607_cov_1.335206_g13389_i0 PRJNA1195374 13727 607 1.335206 8.10470042 Methanosarcinales archaeon 2250255 Archaea Archaea 195 2.2000000000000008e-59   NR RYE82531.1 2250255 g13389 i0 56.6 0.864909390444811 175 75 86.5 1 602 78 35 208 RYE82531.1 MAG: ribosome biogenesis GTP-binding protein YsxC, partial [Methanosarcinales archaeon] diamond 525 195 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
29093662 29093662 PRJNA1195374_P_NODE_57648_length_286_cov_1.084507_g57304_i0 PRJNA1195374 57648 286 1.084507 3.10169002 Methanobacteriota archaeon 2026739 Archaea Archaea 128 1.86e-33   NR RYE95516.1 2026739 g57304 i0 65.9 0.954545454545455 91 31 95.5 0 3 275 256 346 RYE95516.1 MAG: hypothetical protein EOO41_05580, partial [Methanobacteriota archaeon] diamond 273 128 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29282714 29282714 PRJNA1195374_P_NODE_18129_length_532_cov_1.740741_g17786_i0 PRJNA1195374 18129 532 1.740741 9.26074212 Methanobacteriota archaeon 2026739 Archaea Archaea 70.1 2.45e-11   NR RYE95218.1 2026739 g17786 i0 66 0.265037593984962 47 16 26.5 0 527 387 139 185 RYE95218.1 MAG: enoyl-CoA hydratase/isomerase family protein, partial [Methanobacteriota archaeon] diamond 141 70.1 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29996802 29996802 PRJNA1195374_P_NODE_74111_length_249_cov_0.875000_g73767_i0 PRJNA1195374 74111 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 55.5 1.34e-6   NR MCL2115052.1 66852 g73767 i0 47.3 1.21686746987952 55 27 66.3 1 5 169 792 844 MCL2115052.1 DUF4062 domain-containing protein [Methanobrevibacter sp.] diamond 303 55.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
30009380 30009380 PRJNA1195374_P_NODE_21971_length_484_cov_2.043796_g21627_i0 PRJNA1195374 21971 484 2.043796 9.89197264 Methanobacteriota archaeon 2026739 Archaea Archaea 84 1.52e-15   NR RYE99237.1 2026739 g21627 i0 59.1 0.91735537190082606 66 27 40.9 0 1 198 180 245 RYE99237.1 MAG: PQ-loop repeat-containing protein [Methanobacteriota archaeon] diamond 444 84 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
30072301 30072301 PRJNA1195374_P_NODE_22572_length_478_cov_1.520988_g22228_i0 PRJNA1195374 22572 478 1.520988 7.27032264 Halobacteriales archaeon QS_4_69_31 1919176 Archaea Archaea 42.7 0.0418   NR PSQ04328.1 1919176 g22228 i0 49 0.307531380753138 49 24 30.1 1 346 203 6 54 PSQ04328.1 MAG: DUF3194 domain-containing protein [Halobacteriales archaeon QS_4_69_31] diamond 147 42.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon QS_4_69_31
30249647 30249647 PRJNA1195374_P_NODE_53432_length_298_cov_2.377778_g53088_i0 PRJNA1195374 53432 298 2.377778 7.08577844 root 1 Root_unresolved Root_unresolved 49.7 2.47e-4   NR WP_220682300.1 299308 g53088 i0 81.5 2.08389261744966 27 5 27.2 0 217 297 124 150 WP_220682300.1 aspartate aminotransferase family protein [Methanofollis formosanus] diamond 621 49.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanofollis Methanofollis formosanus
30325749 30325749 PRJNA1195374_P_NODE_76752_length_247_cov_0.885057_g76408_i0 PRJNA1195374 76752 247 0.885057 2.18609079 Methanosarcinales archaeon 2250255 Archaea Archaea 142 1.54e-38   NR RYE83637.1 2250255 g76408 i0 78.6 1.02024291497976 84 16 99.6 1 1 246 137 220 RYE83637.1 MAG: hypothetical protein EOO65_03615 [Methanosarcinales archaeon] diamond 252 142 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
30577690 30577690 PRJNA1195374_P_NODE_4193_length_991_cov_1.885621_g3947_i0 PRJNA1195374 4193 991 1.885621 18.68650411 Methanobacteriota archaeon 2026739 Archaea Archaea 79.3 2.44e-12   NR RYE97071.1 2026739 g3947 i0 34.7 0.653884964682139 216 110 58.7 6 989 408 236 442 RYE97071.1 MAG: hypothetical protein EOO41_03900, partial [Methanobacteriota archaeon] diamond 648 79.3 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
30704271 30704271 PRJNA1195374_P_NODE_56114_length_290_cov_1.064516_g55770_i0 PRJNA1195374 56114 290 1.064516 3.0870964 Methanosarcinales archaeon 2250255 Archaea Archaea 53.1 1.26e-5   NR RYE84840.1 2250255 g55770 i0 45.7 0.837931034482759 81 42 83.8 2 288 46 72 150 RYE84840.1 MAG: hypothetical protein EOO65_01550 [Methanosarcinales archaeon] diamond 243 53.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
30925736 30925736 PRJNA1195374_P_NODE_58614_length_283_cov_1.466667_g58270_i0 PRJNA1195374 58614 283 1.466667 4.15066761 Candidatus Methanomethylophilaceae archaeon 2517205 Archaea Archaea 45.4 8.64e-4   NR HKM13850.1 2517205 g58270 i0 47.8 1.46289752650177 46 22 48.8 1 1 138 38 81 HKM13850.1 LSM domain-containing protein [Candidatus Methanomethylophilaceae archaeon] diamond 414 45.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomethylophilaceae   Candidatus Methanomethylophilaceae archaeon
30988833 30988833 PRJNA1195374_P_NODE_82734_length_243_cov_0.894118_g82390_i0 PRJNA1195374 82734 243 0.894118 2.17270674 Methanobacteriota archaeon 2026739 Archaea Archaea 93.6 1.04e-22   NR RYE99996.1 2026739 g82390 i0 80.4 0.62962962962963 51 10 63 0 229 77 53 103 RYE99996.1 MAG: hypothetical protein EOO41_00170 [Methanobacteriota archaeon] diamond 153 93.6 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31114877 31114877 PRJNA1195374_P_NODE_8995_length_732_cov_2.138088_g8684_i0 PRJNA1195374 8995 732 2.138088 15.65080416 Methanosarcinales archaeon 2250255 Archaea Archaea 177 6.45e-50   NR RYE85249.1 2250255 g8684 i0 45.9 0.901639344262295 220 108 85.7 3 730 104 145 364 RYE85249.1 MAG: hypothetical protein EOO65_00785 [Methanosarcinales archaeon] diamond 660 177 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
31146246 31146246 PRJNA1195374_P_NODE_64915_length_267_cov_1.000000_g64571_i0 PRJNA1195374 64915 267 1 2.67 Methanosarcinales archaeon 2250255 Archaea Archaea 110 1.5e-28   NR RYE83851.1 2250255 g64571 i0 60.5 0.966292134831461 86 34 96.6 0 267 10 82 167 RYE83851.1 MAG: hypothetical protein EOO65_03250 [Methanosarcinales archaeon] diamond 258 110 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
31431179 31431179 PRJNA1195374_P_NODE_2256_length_1231_cov_4.949050_g2075_i0 PRJNA1195374 2256 1231 4.94905 60.9228055 Methanosarcinales archaeon 2250255 Archaea Archaea 110 1.88e-22   NR RYE83307.1 2250255 g2075 i0 29.2 0.592201462225833 243 164 57.5 4 335 1042 239 480 RYE83307.1 MAG: ABC transporter permease, partial [Methanosarcinales archaeon] diamond 729 110 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
31620993 31620993 PRJNA1195374_P_NODE_68056_length_258_cov_1.637838_g67712_i0 PRJNA1195374 68056 258 1.637838 4.22562204 Candidatus Methanofastidiosia archaeon 2099674 Archaea Archaea 51.2 2.26e-5   NR NMC58900.1 2099674 g67712 i0 43.9 1.67441860465116 66 35 74.4 1 242 51 75 140 NMC58900.1 hypothetical protein [Candidatus Methanofastidiosia archaeon] diamond 432 51.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia       Candidatus Methanofastidiosia archaeon
31620999 31620999 PRJNA1195374_P_NODE_72056_length_250_cov_1.305085_g71712_i0 PRJNA1195374 72056 250 1.305085 3.2627125 Methanobacteriota archaeon 2026739 Archaea Archaea 120 3.6499999999999997e-31   NR RYE98645.1 2026739 g71712 i0 65.5 1.008 84 27 98.4 1 5 250 34 117 RYE98645.1 MAG: hypothetical protein EOO41_02135 [Methanobacteriota archaeon] diamond 252 120 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31779104 31779104 PRJNA1195374_P_NODE_8537_length_749_cov_2.152367_g8228_i0 PRJNA1195374 8537 749 2.152367 16.12122883 Methanosarcinales archaeon 2250255 Archaea Archaea 254 1.88e-77   NR RYE84885.1 2250255 g8228 i0 59 0.841121495327103 210 86 84.1 0 9 638 356 565 RYE84885.1 MAG: ATP-binding cassette domain-containing protein, partial [Methanosarcinales archaeon] diamond 630 254 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
31810805 31810805 PRJNA1195374_P_NODE_11177_length_666_cov_2.507589_g10851_i0 PRJNA1195374 11177 666 2.507589 16.70054274 Thermoplasmatota archaeon 2806419 Archaea Archaea 56.2 4.97e-6   NR MCL4334626.1 2806419 g10851 i0 33.6 0.509009009009009 113 65 46.4 4 329 637 5 117 MCL4334626.1 single-stranded DNA-binding protein [Thermoplasmatota archaeon] diamond 339 56.2 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
32475411 32475411 PRJNA1195374_P_NODE_15559_length_573_cov_1.796000_g15219_i0 PRJNA1195374 15559 573 1.796 10.29108 Methanobacteriota archaeon 2026739 Archaea Archaea 72.4 3.7e-11   NR RYE99654.1 2026739 g15219 i0 85.7 0.219895287958115 42 5 22 1 95 220 215 255 RYE99654.1 MAG: hypothetical protein EOO41_00755 [Methanobacteriota archaeon] diamond 126 72.4 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
32475417 32475417 PRJNA1195374_P_NODE_17699_length_538_cov_4.236559_g17356_i0 PRJNA1195374 17699 538 4.236559 22.79268742 Methanosarcinales archaeon 2250255 Archaea Archaea 74.7 2.47e-14   NR RYE83798.1 2250255 g17356 i0 58.9 0.312267657992565 56 23 31.2 0 406 239 3 58 RYE83798.1 MAG: hypothetical protein EOO65_03350 [Methanosarcinales archaeon] diamond 168 74.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
32664453 32664453 PRJNA1195374_P_NODE_67680_length_259_cov_1.634409_g67336_i0 PRJNA1195374 67680 259 1.634409 4.23311931 Methanosarcinales archaeon 2250255 Archaea Archaea 68.2 3.39e-11   NR RYE85079.1 2250255 g67336 i0 47.1 0.984555984555985 85 19 90.3 3 255 22 228 293 RYE85079.1 MAG: hypothetical protein EOO65_01090 [Methanosarcinales archaeon] diamond 255 68.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;