RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

30 rows where bioproject = "PRJNA1195374", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 30 ✖

tax_kingdom 1

  • Metazoa · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA1195374 · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12521369 12521369 PRJNA1195374_P_NODE_40410_length_351_cov_1.269784_g40066_i0 PRJNA1195374 40410 351 1.269784 4.45694184 Patiria miniata 46514 Echinodermata other_Eukaryota 105 1.18e-26   NR XP_038066007.1 46514 g40066 i0 72.3 2.29059829059829 65 18 55.6 0 338 144 1 65 XP_038066007.1 60S ribosomal protein L36a-like isoform X2 [Patiria miniata] diamond 804 105 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
21444533 21444533 PRJNA1195374_P_NODE_2557_length_1181_cov_2.685018_g2364_i0 PRJNA1195374 2557 1181 2.685018 31.71006258 Opisthokonta 33154 Echinodermata other_Eukaryota 149 9.18e-39   NR XP_038054891.1 46514 g2364 i0 49 1.18882303132938 153 77 38.6 1 1160 705 65 217 XP_038054891.1 catechol O-methyltransferase-like [Patiria miniata] diamond 1404 150 0.993333333333333 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
21998126 21998126 PRJNA1195374_P_NODE_30258_length_411_cov_2.094675_g29914_i0 PRJNA1195374 30258 411 2.094675 8.60911425 Metazoa 33208 Echinodermata other_Eukaryota 85.1 1.42e-16   NR XP_071500631.1 105358 g29914 i0 75.6 3.04379562043796 45 11 32.8 0 9 143 286 330 XP_071500631.1 cathepsin L-like peptidase [Diadema antillarum] diamond 1251 85.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
22719690 22719690 PRJNA1195374_P_NODE_60398_length_279_cov_0.907767_g60054_i0 PRJNA1195374 60398 279 0.907767 2.53266993 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.7 0.007   NTclustered gi|1752344190|ref|XM_030978235.1| 7668 g60054 i0 96.97 7.39068100358423 33 0 12 1 14 46 1807 1838 PREDICTED: Strongylocentrotus purpuratus cytochrome P450 3A30 (LOC762372), mRNA blastn 2062 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
23273451 23273451 PRJNA1195374_P_NODE_24419_length_459_cov_2.772021_g24075_i0 PRJNA1195374 24419 459 2.772021 12.72357639 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 133 1.1699999999999999e-34   NR PIK51386.1 307972 g24075 i0 44 2.82352941176471 150 79 98 2 451 2 49 193 PIK51386.1 hypothetical protein BSL78_11708 [Apostichopus japonicus] diamond 1296 133 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
23274740 23274740 PRJNA1195374_P_NODE_9539_length_713_cov_5.940625_g9227_i0 PRJNA1195374 9539 713 5.940625 42.35665625 Acanthaster planci 133434 Echinodermata other_Eukaryota 225 2e-71   NR XP_022094823.1 133434 g9227 i0 70.6 3.21458625525947 153 43 64.4 2 54 512 5 155 XP_022094823.1 superoxide dismutase [Cu-Zn]-like [Acanthaster planci] diamond 2292 225 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
24547974 24547974 PRJNA1195374_P_NODE_53620_length_298_cov_1.026667_g53276_i0 PRJNA1195374 53620 298 1.026667 3.05946766 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 134 3.7e-34   NR XP_041467045.1 7654 g53276 i0 69.1 14.758389261745 97 30 97.7 0 291 1 154 250 XP_041467045.1 LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC2-like [Lytechinus variegatus] diamond 4398 135 0.992592592592593 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
26851070 26851070 PRJNA1195374_P_NODE_11301_length_663_cov_4.661017_g10974_i0 PRJNA1195374 11301 663 4.661017 30.90254271 Diadema antillarum 105358 Echinodermata other_Eukaryota 103 2.39e-23   NR XP_071506697.1 105358 g10974 i0 41.5 1.13122171945701 123 69 54.3 2 650 291 85 207 XP_071506697.1 apolipoprotein D-like [Diadema antillarum] diamond 750 103 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
26977509 26977509 PRJNA1195374_P_NODE_70242_length_252_cov_1.480447_g69898_i0 PRJNA1195374 70242 252 1.480447 3.73072644 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 63.2 2.4e-9   NR XP_789379.2 7668 g69898 i0 43.4 0.904761904761905 76 37 90.5 2 25 252 84 153 XP_789379.2 uncharacterized protein LOC584428 [Strongylocentrotus purpuratus] diamond 228 63.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
27420320 27420320 PRJNA1195374_P_NODE_33203_length_392_cov_0.965517_g32859_i0 PRJNA1195374 33203 392 0.965517 3.78482664 Acanthaster planci 133434 Echinodermata other_Eukaryota 59.7 2.07e-7   NR XP_022080385.1 133434 g32859 i0 51.4 1.10204081632653 72 28 54.3 3 13 225 347 412 XP_022080385.1 alpha-L-fucosidase-like isoform X2 [Acanthaster planci] diamond 432 59.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
27641244 27641244 PRJNA1195374_P_NODE_14664_length_589_cov_1.815891_g14325_i0 PRJNA1195374 14664 589 1.815891 10.69559799 Anneissia japonica 1529436 Echinodermata other_Eukaryota 144 8.57e-40   NR XP_033123454.1 1529436 g14325 i0 54.3 1.28862478777589 129 55 65.7 2 5 391 50 174 XP_033123454.1 mesencephalic astrocyte-derived neurotrophic factor homolog [Anneissia japonica] diamond 759 144 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
27956868 27956868 PRJNA1195374_P_NODE_40385_length_351_cov_1.384892_g40041_i0 PRJNA1195374 40385 351 1.384892 4.86097092 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 187 1.6899999999999998e-56   NR XP_011675730.2 7668 g40041 i0 73.3 1.96581196581197 116 31 99.1 0 3 350 97 212 XP_011675730.2 cathepsin Z [Strongylocentrotus purpuratus] diamond 690 187 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
28101948 28101948 PRJNA1195374_P_NODE_47165_length_321_cov_2.657258_g46821_i0 PRJNA1195374 47165 321 2.657258 8.52979818 Metazoa 33208 Echinodermata other_Eukaryota 124 2.0699999999999998e-32   NR XP_033635647.1 7604 g46821 i0 61.3 5.2803738317757 93 36 86.9 0 2 280 165 257 XP_033635647.1 40S ribosomal protein S4, X isoform-like isoform X2 [Asterias rubens] diamond 1695 125 0.992 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
29219906 29219906 PRJNA1195374_P_NODE_14689_length_589_cov_1.038760_g14350_i0 PRJNA1195374 14689 589 1.03876 6.1182964 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 46.2 0.0219   NR XP_011674541.2 7668 g14350 i0 29.5 0.483870967741935 95 54 48.4 3 71 355 38 119 XP_011674541.2 EF-hand domain-containing protein D2 [Strongylocentrotus purpuratus] diamond 285 46.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
29219933 29219933 PRJNA1195374_P_NODE_37389_length_367_cov_1.234694_g37045_i0 PRJNA1195374 37389 367 1.234694 4.53132698 Asterias rubens 7604 Echinodermata other_Eukaryota 44.3 0.0407   NR XP_033636803.1 7604 g37045 i0 44.6 0.604904632152589 74 28 60.5 5 338 117 227 287 XP_033636803.1 usherin-like [Asterias rubens] diamond 222 44.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
29238872 29238872 PRJNA1195374_P_NODE_30649_length_408_cov_2.295522_g30305_i0 PRJNA1195374 30649 408 2.295522 9.36572976 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 71.6 1.79e-11   NR KAJ8043538.1 206669 g30305 i0 34.6 2.83823529411765 136 66 83.1 5 398 60 507 642 KAJ8043538.1 Rabphilin-3A [Holothuria leucospilota] diamond 1158 72 0.994444444444444 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
29427957 29427957 PRJNA1195374_P_NODE_57009_length_287_cov_2.154206_g56665_i0 PRJNA1195374 57009 287 2.154206 6.18257122 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 137 8.65e-39   NR XP_038071026.1 46514 g56665 i0 71.3 3.89895470383275 94 27 98.3 0 285 4 84 177 XP_038071026.1 ADP-ribosylation factor-like protein 3 [Patiria miniata] diamond 1119 138 0.992753623188406 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
30028381 30028381 PRJNA1195374_P_NODE_12551_length_632_cov_15.162791_g12215_i0 PRJNA1195374 12551 632 15.162791 95.82883912 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 143 2.34e-37   NR XP_030838374.1 7668 g12215 i0 59.7 146.962025316456 144 53 66.9 2 33 455 223 364 XP_030838374.1 uncharacterized protein LOC115922811 [Strongylocentrotus purpuratus] diamond 92880 144 0.993055555555556 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
30072296 30072296 PRJNA1195374_P_NODE_17152_length_547_cov_1.453586_g16810_i0 PRJNA1195374 17152 547 1.453586 7.95111542 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 140 1.17e-35   NR XP_041468423.1 7654 g16810 i0 46.4 0.910420475319927 166 79 91 4 530 33 222 377 XP_041468423.1 probable gamma-butyrobetaine dioxygenase [Lytechinus variegatus] diamond 498 140 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
30135241 30135241 PRJNA1195374_P_NODE_30092_length_413_cov_0.905882_g29748_i0 PRJNA1195374 30092 413 0.905882 3.74129266 Asterias rubens 7604 Echinodermata other_Eukaryota 65.1 3.36e-9   NR XP_033637736.1 7604 g29748 i0 32.3 0.900726392251816 124 76 87.2 3 4 363 180 299 XP_033637736.1 uncharacterized protein LOC117298512 [Asterias rubens] diamond 372 65.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
30166999 30166999 PRJNA1195374_P_NODE_10452_length_686_cov_1.579119_g10133_i0 PRJNA1195374 10452 686 1.579119 10.83275634 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 56.6 2.15e-5   NR XP_041469748.1 7654 g10133 i0 27.3 0.704081632653061 161 106 70.4 4 16 498 125 274 XP_041469748.1 G2/mitotic-specific cyclin S13-7-like [Lytechinus variegatus] diamond 483 56.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
30691659 30691659 PRJNA1195374_P_NODE_46873_length_323_cov_1.048000_g46529_i0 PRJNA1195374 46873 323 1.048 3.38504 root 1 Root_unresolved Root_unresolved 95.9 9.61e-21   NR XP_033637737.1 7604 g46529 i0 77.4 4.35603715170279 53 12 49.2 0 322 164 340 392 XP_033637737.1 actin-related protein 2-B isoform X2 [Asterias rubens] diamond 1407 95.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
30786505 30786505 PRJNA1195374_P_NODE_36034_length_374_cov_2.604651_g35690_i0 PRJNA1195374 36034 374 2.604651 9.74139474 Opisthokonta 33154 Echinodermata other_Eukaryota 125 5.67e-33   NR KAJ8042686.1 206669 g35690 i0 55.6 7.96524064171123 124 46 99.5 2 372 1 123 237 KAJ8042686.1 60S ribosomal protein L6 [Holothuria leucospilota] diamond 2979 125 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
30849679 30849679 PRJNA1195374_P_NODE_55554_length_291_cov_1.766055_g55210_i0 PRJNA1195374 55554 291 1.766055 5.13922005 Metazoa 33208 Echinodermata other_Eukaryota 140 9.55e-39   NR XP_030842155.1 7668 g55210 i0 71.9 9.89690721649485 96 27 99 0 3 290 69 164 XP_030842155.1 ribose-5-phosphate isomerase [Strongylocentrotus purpuratus] diamond 2880 140 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
31020363 31020363 PRJNA1195374_P_NODE_40255_length_352_cov_1.103943_g39911_i0 PRJNA1195374 40255 352 1.103943 3.88587936 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 67.4 3.04e-10   NR KAJ8022734.1 206669 g39911 i0 38.6 0.707386363636364 83 51 70.7 0 297 49 5 87 KAJ8022734.1 hypothetical protein HOLleu_37718 [Holothuria leucospilota] diamond 249 67.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
31196863 31196863 PRJNA1195374_P_NODE_8375_length_755_cov_17.890029_g8067_i0 PRJNA1195374 8375 755 17.890029 135.06971895 Metazoa 33208 Echinodermata other_Eukaryota 165 5.08e-48   NR XP_033632396.1 7604 g8067 i0 67.2 2.86092715231788 128 36 50.9 1 691 308 1 122 XP_033632396.1 60S ribosomal protein L31-like [Asterias rubens] diamond 2160 165 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
31589634 31589634 PRJNA1195374_P_NODE_83076_length_242_cov_1.366864_g82732_i0 PRJNA1195374 83076 242 1.366864 3.30781088 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 73.2 6.87e-13   NR XP_030855258.1 7668 g82732 i0 67.3 1.21487603305785 49 16 60.7 0 207 61 422 470 XP_030855258.1 T-complex protein 1 subunit delta [Strongylocentrotus purpuratus] diamond 294 73.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
32285706 32285706 PRJNA1195374_P_NODE_13819_length_605_cov_1.445489_g13481_i0 PRJNA1195374 13819 605 1.445489 8.74520845 Diadema antillarum 105358 Echinodermata other_Eukaryota 130 2.8499999999999996e-32   NR XP_071502385.1 105358 g13481 i0 44.9 0.629752066115702 127 60 63 2 112 492 171 287 XP_071502385.1 nucleoredoxin-like [Diadema antillarum] diamond 381 130 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
32714999 32714999 PRJNA1195374_P_NODE_17660_length_539_cov_1.654506_g17318_i0 PRJNA1195374 17660 539 1.654506 8.91778734 Metazoa 33208 Echinodermata other_Eukaryota 81.6 1.09e-14   NR XP_038047285.1 46514 g17318 i0 41.1 2.25417439703154 90 53 50.1 0 288 19 225 314 XP_038047285.1 uncharacterized protein LOC119721326 [Patiria miniata] diamond 1215 81.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
32840850 32840850 PRJNA1195374_P_NODE_81300_length_244_cov_0.900585_g80956_i0 PRJNA1195374 81300 244 0.900585 2.1974274 Echinoidea 7625 Echinodermata other_Eukaryota 54.7 2.32e-6   NR XP_054770161.2 7653 g80956 i0 37 3.63934426229508 81 49 99.6 2 1 243 375 453 XP_054770161.2 eEF1A lysine and N-terminal methyltransferase-like [Lytechinus pictus] diamond 888 55.1 0.992740471869329 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;