RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1195374", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1195374 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29282742 29282742 PRJNA1195374_P_NODE_45369_length_329_cov_1.121094_g45025_i0 PRJNA1195374 45369 329 1.121094 3.68839926 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 42.4 0.0313   NR HEY4026966.1 2052315 g45025 i0 40.4 0.519756838905775 57 34 52 0 26 196 9 65 HEY4026966.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 171 42.4 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31039577 31039577 PRJNA1195374_P_NODE_60555_length_278_cov_1.497561_g60211_i0 PRJNA1195374 60555 278 1.497561 4.16321958 Bacteria 2 Bacteria Bacteria 99.8 1.1e-22   NR HSQ00683.1 2052315 g60211 i0 58.6 6.60431654676259 87 34 92.8 2 3 260 199 284 HSQ00683.1 low-specificity L-threonine aldolase [Candidatus Dormiibacterota bacterium] diamond 1836 99.8 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;