RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1195374", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 4 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 4 ✖

bioproject 1

  • PRJNA1195374 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2871769 2871769 PRJNA1195374_P_NODE_10703_length_679_cov_2.561056_g10382_i0 PRJNA1195374 10703 679 2.5610560000000002 17.38957024 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 270 1.33e-86   NR MDD4017101.1 2212473 g10382 i0 63.7 19.1929307805596 201 68 88.8 2 9 611 143 338 MDD4017101.1 UDP-glucose 4-epimerase GalE [Kiritimatiellia bacterium] diamond 13032 270 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
26787744 26787744 PRJNA1195374_P_NODE_72921_length_250_cov_0.870056_g72577_i0 PRJNA1195374 72921 250 0.870056 2.17514 Pontiella sp. 2837462 Bacteria Bacteria 78.6 9.93e-15   NR WP_372847043.1 2837462 g72577 i0 46.5 3.096 86 43 99.6 1 250 2 303 388 WP_372847043.1 UTP--glucose-1-phosphate uridylyltransferase [Pontiella sp.] diamond 774 78.6 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Pontiellaceae Pontiella Pontiella sp.
27514779 27514779 PRJNA1195374_P_NODE_27523_length_432_cov_3.403900_g27179_i0 PRJNA1195374 27523 432 3.4039 14.704848 Kiritimatiellota bacterium 2599938 Bacteria Bacteria 55.5 9.49e-7   NR MCX6998616.1 2599938 g27179 i0 29.6 2.39583333333333 115 79 79.2 2 18 359 1 114 MCX6998616.1 phenylpyruvate tautomerase MIF-related protein [Kiritimatiellota bacterium] diamond 1035 55.5 1 Bacteria PVC group Pseudomonadati Kiritimatiellota         Kiritimatiellota bacterium
30925752 30925752 PRJNA1195374_P_NODE_75014_length_248_cov_0.920000_g74670_i0 PRJNA1195374 75014 248 0.92 2.2816 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 45.1 0.00626   NR MBO7482871.1 2212473 g74670 i0 45 0.483870967741935 40 22 48.4 0 3 122 950 989 MBO7482871.1 leucine-rich repeat protein [Kiritimatiellia bacterium] diamond 120 45.1 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;