RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where bioproject = "PRJNA1195374", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 6 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 6 ✖

bioproject 1

  • PRJNA1195374 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17620425 17620425 PRJNA1195374_P_NODE_31674_length_401_cov_3.725610_g31330_i0 PRJNA1195374 31674 401 3.72561 14.9396961 Ignavibacteria bacterium 2053306 Bacteria Bacteria 209 1.74e-62   NR MDP3445275.1 2053306 g31330 i0 82.4 0.980049875311721 131 23 98 0 3 395 298 428 MDP3445275.1 Hsp70 family protein [Ignavibacteria bacterium] diamond 393 209 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
25268895 25268895 PRJNA1195374_P_NODE_39680_length_355_cov_1.003546_g39336_i0 PRJNA1195374 39680 355 1.003546 3.5625883 Bacteria 2 Bacteria Bacteria 163 5.699999999999999e-47   NR MDZ7763018.1 2614255 g39336 i0 67.2 18.0845070422535 119 38 99.7 1 354 1 155 273 MDZ7763018.1 NAD(P)-dependent alcohol dehydrogenase [Melioribacteraceae bacterium] diamond 6420 163 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium
26755685 26755685 PRJNA1195374_P_NODE_32561_length_396_cov_0.891641_g32217_i0 PRJNA1195374 32561 396 0.891641 3.53089836 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 150 2.0699999999999998e-42   NR MCF8265767.1 2614255 g32217 i0 56.5 3.98484848484848 131 40 99.2 1 395 3 49 162 MCF8265767.1 deoxyribodipyrimidine photolyase [Melioribacteraceae bacterium] diamond 1578 150 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium
28903836 28903836 PRJNA1195374_P_NODE_64088_length_269_cov_1.178571_g63744_i0 PRJNA1195374 64088 269 1.178571 3.17035599 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 99 2.94e-23   NR HOI30523.1 2614255 g63744 i0 69.8 1.41635687732342 63 19 70.3 0 266 78 168 230 HOI30523.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Melioribacteraceae bacterium] diamond 381 99 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium
29535494 29535494 PRJNA1195374_P_NODE_32530_length_396_cov_1.108359_g32186_i0 PRJNA1195374 32530 396 1.108359 4.38910164 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 84 2.64e-17   NR HMN48934.1 2651163 g32186 i0 41.3 1.63636363636364 104 58 78 3 83 391 39 140 HMN48934.1 PaaI family thioesterase [Ignavibacteriaceae bacterium] diamond 648 84 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
30514711 30514711 PRJNA1195374_P_NODE_15433_length_575_cov_1.418327_g15093_i0 PRJNA1195374 15433 575 1.418327 8.15538025 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 67.8 4.23e-10   NR MCX6134544.1 2049428 g15093 i0 36.5 1.32521739130435 126 71 64.7 3 132 503 93 211 MCX6134544.1 ankyrin repeat domain-containing protein [Ignavibacteriales bacterium] diamond 762 67.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;