RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1195374", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1195374 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20168955 20168955 PRJNA1195374_P_NODE_38416_length_361_cov_2.333333_g38072_i0 PRJNA1195374 38416 361 2.333333 8.42333213 Bacteria 2 Bacteria Bacteria 101 7.249999999999999e-24   NR HIA85863.1 2026760 g38072 i0 39.6 4.80332409972299 144 28 70.6 1 358 104 47 190 HIA85863.1 hypothetical protein [Fidelibacterota bacterium] diamond 1734 101 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29629892 29629892 PRJNA1195374_P_NODE_66790_length_262_cov_1.047619_g66446_i0 PRJNA1195374 66790 262 1.047619 2.74476178 Fidelibacterota bacterium 2026760 Bacteria Bacteria 90.1 7.29e-19   NR MEE2876654.1 2026760 g66446 i0 58 2.33587786259542 69 29 79 0 261 55 362 430 MEE2876654.1 kynureninase [Fidelibacterota bacterium] diamond 612 90.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;