RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1195374", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1195374 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29314498 29314498 PRJNA1195374_P_NODE_17069_length_548_cov_1.926316_g16727_i0 PRJNA1195374 17069 548 1.926316 10.55621168 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 60.5 4.76e-7   NR MCU0330438.1 2447898 g16727 i0 28.9 0.985401459854015 180 123 96.4 3 534 7 19 197 MCU0330438.1 leucyl aminopeptidase [Candidatus Kapaibacterium sp.] diamond 540 60.5 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29522916 29522916 PRJNA1195374_P_NODE_62670_length_273_cov_0.935000_g62326_i0 PRJNA1195374 62670 273 0.935 2.55255 Pseudomonadati 3379134 Bacteria Bacteria 61.6 1.62e-9   NR MCS7001004.1 2447898 g62326 i0 60.8 4.02197802197802 51 20 56 0 1 153 85 135 MCS7001004.1 Hsp20/alpha crystallin family protein [Candidatus Kapaibacterium sp.] diamond 1098 61.6 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;