RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1195374", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1195374 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27186035 27186035 PRJNA1195374_P_NODE_41702_length_345_cov_1.128676_g41358_i0 PRJNA1195374 41702 345 1.128676 3.8939322 Pseudomonadati 3379134 Bacteria Bacteria 90.9 1.91e-19   NR WP_020403545.1 454600 g41358 i0 44.8 11.5304347826087 105 57 90.4 1 13 324 103 207 WP_020403545.1 SDR family oxidoreductase [Gracilimonas tropica] diamond 3978 91.7 0.991275899672846 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Gracilimonas Gracilimonas tropica
30262250 30262250 PRJNA1195374_P_NODE_53872_length_297_cov_1.160714_g53528_i0 PRJNA1195374 53872 297 1.160714 3.44732058 Balneolaceae bacterium ANBcel3 3044601 Bacteria Bacteria 45.4 0.00792   NR MDI6401011.1 3044601 g53528 i0 36.2 0.696969696969697 69 36 61.6 2 258 76 81 149 MDI6401011.1 apolipoprotein N-acyltransferase [Balneolaceae bacterium ANBcel3] diamond 207 45.4 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium ANBcel3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;