RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1195374", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA1195374 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14350509 14350509 PRJNA1195374_P_NODE_3352_length_1077_cov_2.657371_g3128_i0 PRJNA1195374 3352 1077 2.657371 28.61988567 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 308 2.97e-95   NR MBM4439629.1 2053607 g3128 i0 54.3 10.1615598885794 302 130 84.1 3 2 907 401 694 MBM4439629.1 enoyl-CoA hydratase/isomerase family protein [Candidatus Rokuibacteriota bacterium] diamond 10944 308 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
27736112 27736112 PRJNA1195374_P_NODE_20204_length_504_cov_2.489559_g19861_i0 PRJNA1195374 20204 504 2.489559 12.54737736 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 57.4 6.87e-7   NR MBI4611398.1 2053607 g19861 i0 29.4 1.45833333333333 126 68 73.8 3 2 373 49 155 MBI4611398.1 gamma-glutamylcyclotransferase [Candidatus Rokuibacteriota bacterium] diamond 735 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
28196689 28196689 PRJNA1195374_P_NODE_50086_length_311_cov_0.957983_g49742_i0 PRJNA1195374 50086 311 0.957983 2.97932713 Bacteria candidate phyla 1783234 Bacteria Bacteria 93.2 3.63e-21   NR PYM83509.1 2053607 g49742 i0 54.8 15.395498392283 93 41 89.7 1 308 30 50 141 PYM83509.1 MAG: hypothetical protein DME09_10715 [Candidatus Rokuibacteriota bacterium] diamond 4788 93.2 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30894061 30894061 PRJNA1195374_P_NODE_41874_length_344_cov_1.372694_g41530_i0 PRJNA1195374 41874 344 1.372694 4.72206736 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 79.7 1.31e-15   NR MBI4591809.1 2053607 g41530 i0 50.8 1.15116279069767 65 32 56.7 0 1 195 34 98 MBI4591809.1 NIPSNAP family protein [Candidatus Rokuibacteriota bacterium] diamond 396 79.7 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;