RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1195374", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Buchananiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Buchananiibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA1195374 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28872423 28872423 PRJNA1195374_P_NODE_75348_length_248_cov_0.880000_g75004_i0 PRJNA1195374 75348 248 0.88 2.1824 Candidatus Buchananbacteria bacterium 2268182 Bacteria Bacteria 79 6.46e-16   NR MFA6422428.1 2268182 g75004 i0 50 1.82661290322581 78 39 94.4 0 5 238 123 200 MFA6422428.1 histidine phosphatase family protein [Candidatus Buchananbacteria bacterium] diamond 453 79 1 Bacteria Bacteria candidate phyla   Candidatus Buchananiibacteriota         Candidatus Buchananbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;