RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1193541", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1193541 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29629833 29629833 PRJNA1193541_P_NODE_7770_length_314_cov_0.767635_g7632_i0 PRJNA1193541 7770 314 0.767635 2.4103739 Anaerolineae bacterium 2052143 Bacteria Bacteria 42.7 0.0188   NR NIV31772.1 2052143 g7632 i0 43.5 0.439490445859873 46 24 43.9 1 4 141 40 83 NIV31772.1 hypothetical protein [Anaerolineae bacterium] diamond 138 42.7 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
31557952 31557952 PRJNA1193541_P_NODE_8776_length_293_cov_2.559091_g8638_i0 PRJNA1193541 8776 293 2.559091 7.49813663 Anaerolineae bacterium 2052143 Bacteria Bacteria 97.8 9.43e-22   NR MFN2167986.1 2052143 g8638 i0 46.2 1.06484641638225 104 48 98.3 3 3 290 230 333 MFN2167986.1 S8 family serine peptidase [Anaerolineae bacterium] diamond 312 97.8 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;