RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1193541" and tax_phylum = "Basidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1193541 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7973902 7973902 PRJNA1193541_P_NODE_15187_length_241_cov_0.886905_g15049_i0 PRJNA1193541 15187 241 0.886905 2.13744105 Malassezia globosa 76773 Fungi Fungi 412 8.64e-111   NTclustered gi|164656998|ref|XM_001729574.1| 425265 g15049 i0 97.51 1 241 6 100 0 1 241 605 845 Malassezia globosa CBS 7966 uncharacterized protein (MGL_3170), partial mRNA blastn 241 412 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
16344935 16344935 PRJNA1193541_P_NODE_9913_length_280_cov_1.082126_g9775_i0 PRJNA1193541 9913 280 1.082126 3.0299528 Malassezia 55193 Fungi Fungi 508 1.27e-139   NTclustered gi|1321659599|gb|KY911093.1| 76775 g9775 i0 100 59.85 275 0 98 0 1 275 31961 32235 Malassezia restricta mitochondrion, complete genome blastn 16758 508 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17620177 17620177 PRJNA1193541_P_NODE_6554_length_338_cov_2.000000_g6416_i0 PRJNA1193541 6554 338 2 6.76 root 1 Root_unresolved Root_unresolved 625 1.4999999999999999e-174   NTclustered gi|1546635596|ref|XR_003525368.1| 76775 g6416 i0 100 100 338 0 100 0 1 338 1099 762 Malassezia restricta 18S ribosomal RNA (MRET_r0002), rRNA blastn 33800 625 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
21997317 21997317 PRJNA1193541_P_NODE_13798_length_245_cov_1.470930_g13660_i0 PRJNA1193541 13798 245 1.47093 3.6037785 Malassezia restricta 76775 Fungi Fungi 453 5.1900000000000006e-123   NTclustered gi|1546632244|ref|XM_027627782.1| 76775 g13660 i0 100 1 245 0 100 0 1 245 1661 1905 Malassezia restricta beta-glucan synthesis-associated protein KRE6 (MRET_1155), partial mRNA blastn 245 453 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
23272739 23272739 PRJNA1193541_P_NODE_11799_length_254_cov_1.701657_g11661_i0 PRJNA1193541 11799 254 1.701657 4.32220878 Malassezia restricta 76775 Fungi Fungi 425 1.18e-114   NTclustered gi|1546636935|ref|XM_027630110.1| 76775 g11661 i0 96.85 1.88582677165354 254 8 100 0 1 254 144 397 Malassezia restricta aldo/keto reductase family (MRET_3483), partial mRNA blastn 479 425 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
28808957 28808957 PRJNA1193541_P_NODE_14568_length_243_cov_0.905882_g14430_i0 PRJNA1193541 14568 243 0.905882 2.20129326 Peniophora sp. CONT 1314672 Fungi Fungi 93.6 3.09e-20   NR KZV71638.1 1314672 g14430 i0 91.5 1.16049382716049 47 4 58 0 176 36 186 232 KZV71638.1 mRNA capping enzyme [Peniophora sp. CONT] diamond 282 93.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Peniophoraceae Peniophora Peniophora sp. CONT

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;