contig_metadata
14 rows where bioproject = "PRJNA1193541" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2317743 | 2317743 | PRJNA1193541_P_NODE_12502_length_250_cov_0.870056_g12364_i0 | PRJNA1193541 | 12502 | 250 | 0.870056 | 2.17514 | Bacillus | 1386 | Bacteria | Bacteria | 451 | 1.91e-122 | NTclustered | gi|2006627593|gb|CP065159.1| | 1390 | g12364 | i0 | 99.2 | 100 | 250 | 2 | 100 | 0 | 1 | 250 | 2919638 | 2919887 | Bacillus amyloliquefaciens strain GXU-1 chromosome, complete genome | blastn | 25000 | 451 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus amyloliquefaciens | ||
| 4147489 | 4147489 | PRJNA1193541_P_NODE_12944_length_248_cov_1.462857_g12806_i0 | PRJNA1193541 | 12944 | 248 | 1.462857 | 3.62788536 | Enterococcus cecorum | 44008 | Bacteria | Bacteria | 442 | 1.1399999999999995e-119 | NTclustered | gi|939198273|gb|CP010060.1| | 44008 | g12806 | i0 | 98.79 | 27 | 248 | 3 | 100 | 0 | 1 | 248 | 1805585 | 1805338 | Enterococcus cecorum strain SA1 genome | blastn | 6696 | 442 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus cecorum | ||
| 5423928 | 5423928 | PRJNA1193541_P_NODE_9465_length_285_cov_1.198113_g9327_i0 | PRJNA1193541 | 9465 | 285 | 1.198113 | 3.41462205 | Enterococcus cecorum | 44008 | Bacteria | Bacteria | 521 | 1.6699999999999996e-143 | NTclustered | gi|2737620634|gb|CP144498.1| | 44008 | g9327 | i0 | 99.649 | 27 | 285 | 1 | 100 | 0 | 1 | 285 | 985257 | 984973 | Enterococcus cecorum strain 66 chromosome, complete genome | blastn | 7695 | 521 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus cecorum | ||
| 7420291 | 7420291 | PRJNA1193541_P_NODE_13306_length_247_cov_0.885057_g13168_i0 | PRJNA1193541 | 13306 | 247 | 0.885057 | 2.18609079 | Bacilli | 91061 | Bacteria | Bacteria | 287 | 5.62e-73 | NTclustered | gi|1395792743|gb|CP029653.1| | 1280 | g13168 | i0 | 98.758 | 52.2024291497976 | 161 | 2 | 65 | 0 | 1 | 161 | 1646561 | 1646721 | Staphylococcus aureus strain AR_0470 chromosome, complete genome | blastn | 12894 | 287 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 7420292 | 7420292 | PRJNA1193541_P_NODE_13646_length_246_cov_0.890173_g13508_i0 | PRJNA1193541 | 13646 | 246 | 0.890173 | 2.18982558 | Bacillota | 1239 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|1963758695|emb|LR962115.1| | 1351 | g13508 | i0 | 100 | 12.0365853658537 | 246 | 0 | 100 | 0 | 1 | 246 | 511378 | 511133 | Enterococcus faecalis isolate 26975_1#262 genome assembly, chromosome: 1 | blastn | 2961 | 455 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecalis | ||
| 9970529 | 9970529 | PRJNA1193541_P_NODE_11068_length_265_cov_1.203125_g10930_i0 | PRJNA1193541 | 11068 | 265 | 1.203125 | 3.18828125 | Lactobacillus | 1578 | Bacteria | Bacteria | 490 | 4.3299999999999986e-134 | NTclustered | gi|470474342|ref|NR_076210.1| | 33959 | g10930 | i0 | 100 | 504.747169811321 | 265 | 0 | 100 | 0 | 1 | 265 | 1775 | 1511 | Lactobacillus johnsonii strain NCC 533 23S ribosomal RNA gene, complete sequence | blastn | 133758 | 490 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus johnsonii | ||
| 16344936 | 16344936 | PRJNA1193541_P_NODE_9993_length_279_cov_0.878641_g9855_i0 | PRJNA1193541 | 9993 | 279 | 0.878641 | 2.45140839 | Clostridium botulinum | 1491 | Bacteria | Bacteria | 167 | 3.67e-51 | NR | MBY7057768.1 | 1491 | g9855 | i0 | 91.4 | 3 | 93 | 8 | 100 | 0 | 279 | 1 | 21 | 113 | MBY7057768.1 dipeptide ABC transporter permease DppC [Clostridium botulinum] | diamond | 837 | 167 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium botulinum | ||
| 18172188 | 18172188 | PRJNA1193541_P_NODE_12775_length_249_cov_0.875000_g12637_i0 | PRJNA1193541 | 12775 | 249 | 0.875 | 2.17875 | Caldifermentibacillus hisashii | 996558 | Bacteria | Bacteria | 250 | 7.4499999999999995e-62 | NTclustered | gi|2760084077|gb|CP159977.1| | 996558 | g12637 | i0 | 100 | 27.0481927710843 | 135 | 0 | 54 | 0 | 1 | 135 | 3295691 | 3295557 | Caldifermentibacillus hisashii strain FSL W8-0751 chromosome, complete genome | blastn | 6735 | 250 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Caldifermentibacillus | Caldifermentibacillus hisashii | ||
| 18893856 | 18893856 | PRJNA1193541_P_NODE_13355_length_247_cov_0.885057_g13217_i0 | PRJNA1193541 | 13355 | 247 | 0.885057 | 2.18609079 | Bacillus | 1386 | Bacteria | Bacteria | 451 | 1.88e-122 | NTclustered | gi|2207831829|gb|CP044132.1| | 1390 | g13217 | i0 | 99.595 | 22 | 247 | 1 | 100 | 0 | 1 | 247 | 1925432 | 1925678 | Bacillus amyloliquefaciens strain ZKY01 chromosome, complete genome | blastn | 5434 | 451 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus amyloliquefaciens | ||
| 21444339 | 21444339 | PRJNA1193541_P_NODE_14457_length_243_cov_0.905882_g14319_i0 | PRJNA1193541 | 14457 | 243 | 0.905882 | 2.20129326 | Streptococcus | 1301 | Bacteria | Bacteria | 388 | 1.47e-103 | NTclustered | gi|2072520965|gb|CP079821.1| | 1234680 | g14319 | i0 | 95.473 | 13.8518518518519 | 243 | 11 | 100 | 0 | 1 | 243 | 13902 | 14144 | Streptococcus rubneri strain LPB0404 chromosome, complete genome | blastn | 3366 | 388 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus rubneri | ||
| 27546331 | 27546331 | PRJNA1193541_P_NODE_10104_length_277_cov_1.465686_g9966_i0 | PRJNA1193541 | 10104 | 277 | 1.465686 | 4.05995022 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 84 | 1.9e-16 | NR | MBR5577876.1 | 1898203 | g9966 | i0 | 53.3 | 0.974729241877256 | 90 | 40 | 97.5 | 2 | 7 | 276 | 1223 | 1310 | MBR5577876.1 beta-N-acetylglucosaminidase domain-containing protein [Lachnospiraceae bacterium] | diamond | 270 | 84 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 28935638 | 28935638 | PRJNA1193541_P_NODE_14008_length_245_cov_0.895349_g13870_i0 | PRJNA1193541 | 14008 | 245 | 0.895349 | 2.19360505 | Staphylococcus aureus | 1280 | Bacteria | Bacteria | 93.2 | 9.33e-23 | NR | WP_348968639.1 | 1280 | g13870 | i0 | 100 | 0.6 | 49 | 0 | 60 | 0 | 98 | 244 | 1 | 49 | WP_348968639.1 hypothetical protein, partial [Staphylococcus aureus] | diamond | 147 | 93.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 30072282 | 30072282 | PRJNA1193541_P_NODE_13632_length_246_cov_0.890173_g13494_i0 | PRJNA1193541 | 13632 | 246 | 0.890173 | 2.18982558 | Brevibacillus thermoruber | 33942 | Bacteria | Bacteria | 43.5 | 0.0195 | NR | WP_035297969.1 | 33942 | g13494 | i0 | 36.4 | 0.670731707317073 | 55 | 35 | 67.1 | 0 | 47 | 211 | 6 | 60 | WP_035297969.1 hypothetical protein [Brevibacillus thermoruber] | diamond | 165 | 43.5 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Brevibacillus | Brevibacillus thermoruber | ||
| 30925676 | 30925676 | PRJNA1193541_P_NODE_14054_length_245_cov_0.895349_g13916_i0 | PRJNA1193541 | 14054 | 245 | 0.895349 | 2.19360505 | Thermicanus aegyptius | 94009 | Bacteria | Bacteria | 137 | 3.57e-37 | NR | WP_028986596.1 | 94009 | g13916 | i0 | 86.4 | 0.991836734693878 | 81 | 11 | 99.2 | 0 | 245 | 3 | 34 | 114 | WP_028986596.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [Thermicanus aegyptius] | diamond | 243 | 137 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillales Family X. Incertae Sedis | Thermicanus | Thermicanus aegyptius |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;