RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1193541", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 4 ✖

tax_phylum 1

  • Acidobacteriota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1193541 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13074264 13074264 PRJNA1193541_P_NODE_4391_length_396_cov_0.953560_g4253_i0 PRJNA1193541 4391 396 0.95356 3.7760976 Thermoanaerobaculaceae bacterium 2699758 Bacteria Bacteria 309 2.04e-79   NTclustered gi|2874254005|emb|OY970330.1| 2699758 g4253 i0 81.481 12.3863636363636 378 68 95 2 7 383 7171677 7171301 MAG: Thermoanaerobaculaceae bacterium isolate MFD05537.bin.c.1 genome assembly, chromosome: 1 blastn 4905 309 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia Thermoanaerobaculales Thermoanaerobaculaceae   Thermoanaerobaculaceae bacterium
28272327 28272327 PRJNA1193541_P_NODE_12186_length_251_cov_0.865169_g12048_i0 PRJNA1193541 12186 251 0.865169 2.17157419 Blastocatellia bacterium 2052146 Bacteria Bacteria 42.7 0.0389   NR HQR40170.1 2052146 g12048 i0 46.3 0.49003984063745 41 22 49 0 207 85 141 181 HQR40170.1 abhydrolase domain-containing 18 [Blastocatellia bacterium] diamond 123 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
28367110 28367110 PRJNA1193541_P_NODE_15106_length_241_cov_0.916667_g14968_i0 PRJNA1193541 15106 241 0.916667 2.20916747 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 134 1.57e-34   NR HYP09154.1 2212468 g14968 i0 83.8 0.995850622406639 80 13 99.6 0 2 241 65 144 HYP09154.1 glycosyltransferase [Bryobacteraceae bacterium] diamond 240 134 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30154322 30154322 PRJNA1193541_P_NODE_14272_length_244_cov_0.900585_g14134_i0 PRJNA1193541 14272 244 0.900585 2.1974274 Bacteria 2 Bacteria Bacteria 129 2.8e-33   NR MBI2219661.1 1978231 g14134 i0 76.5 4.97950819672131 81 19 99.6 0 1 243 49 129 MBI2219661.1 phosphoglucosamine mutase [Acidobacteriota bacterium] diamond 1215 129 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;