contig_metadata
11 rows where bioproject = "PRJNA1193541" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4870477 | 4870477 | PRJNA1193541_P_NODE_4964_length_377_cov_1.976974_g4826_i0 | PRJNA1193541 | 4964 | 377 | 1.976974 | 7.45319198 | Gemmataceae | 1914233 | Bacteria | Bacteria | 525 | 1.7599999999999994e-144 | NTclustered | gi|1015440974|gb|CP011271.1| | 1630693 | g4826 | i0 | 91.842 | 220.31299734748 | 380 | 25 | 99 | 6 | 2 | 377 | 558588 | 558211 | Gemmata sp. SH-PL17, complete genome | blastn | 83058 | 527 | 0.996204933586338 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata sp. SH-PL17 | |
| 7973916 | 7973916 | PRJNA1193541_P_NODE_2367_length_504_cov_1.754060_g2230_i0 | PRJNA1193541 | 2367 | 504 | 1.75406 | 8.8404624 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 658 | 0 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g2230 | i0 | 90.335 | 110.855158730159 | 507 | 41 | 99 | 8 | 1 | 502 | 2003319 | 2002816 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 55871 | 658 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 15623458 | 15623458 | PRJNA1193541_P_NODE_5193_length_371_cov_1.033557_g5055_i0 | PRJNA1193541 | 5193 | 371 | 1.033557 | 3.83449647 | Prosthecobacter algae | 1144682 | Bacteria | Bacteria | 97.8 | 8.73e-21 | NR | WP_345739054.1 | 1144682 | g5055 | i0 | 60.2 | 5.82210242587601 | 123 | 49 | 99.5 | 0 | 369 | 1 | 852 | 974 | WP_345739054.1 IPT/TIG domain-containing protein, partial [Prosthecobacter algae] | diamond | 2160 | 97.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter algae | |
| 26679731 | 26679731 | PRJNA1193541_P_NODE_15101_length_241_cov_0.916667_g14963_i0 | PRJNA1193541 | 15101 | 241 | 0.916667 | 2.20916747 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 45.8 | 0.00306 | NR | MFH0881005.1 | 1932692 | g14963 | i0 | 55.2 | 1.36929460580913 | 29 | 13 | 36.1 | 0 | 155 | 241 | 753 | 781 | MFH0881005.1 LamG domain-containing protein [Lentisphaerota bacterium] | diamond | 330 | 45.8 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 27988397 | 27988397 | PRJNA1193541_P_NODE_8185_length_305_cov_1.271552_g8047_i0 | PRJNA1193541 | 8185 | 305 | 1.271552 | 3.8782336 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 44.3 | 0.0142 | NR | MEI6341235.1 | 2026799 | g8047 | i0 | 42 | 0.491803278688525 | 50 | 27 | 47.2 | 1 | 124 | 267 | 109 | 158 | MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] | diamond | 150 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28177547 | 28177547 | PRJNA1193541_P_NODE_12066_length_251_cov_0.865169_g11928_i0 | PRJNA1193541 | 12066 | 251 | 0.865169 | 2.17157419 | Lacipirellulaceae bacterium | 2691534 | Bacteria | Bacteria | 40.4 | 0.038 | NR | HVT29968.1 | 2691534 | g11928 | i0 | 72.4 | 0.346613545816733 | 29 | 8 | 34.7 | 0 | 89 | 3 | 29 | 57 | HVT29968.1 hypothetical protein [Lacipirellulaceae bacterium] | diamond | 87 | 40.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Lacipirellulaceae bacterium | ||
| 28999089 | 28999089 | PRJNA1193541_P_NODE_13748_length_246_cov_0.890173_g13610_i0 | PRJNA1193541 | 13748 | 246 | 0.890173 | 2.18982558 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 129 | 8.94e-33 | NR | HLJ09676.1 | 2026779 | g13610 | i0 | 74.4 | 1 | 82 | 21 | 100 | 0 | 1 | 246 | 338 | 419 | HLJ09676.1 DUF1592 domain-containing protein [Planctomycetaceae bacterium] | diamond | 246 | 129 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 29440457 | 29440457 | PRJNA1193541_P_NODE_11050_length_265_cov_1.557292_g10912_i0 | PRJNA1193541 | 11050 | 265 | 1.557292 | 4.1268238 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 42.7 | 0.0475 | NR | MFL6529243.1 | 2201154 | g10912 | i0 | 40.5 | 0.418867924528302 | 37 | 22 | 41.9 | 0 | 116 | 226 | 196 | 232 | MFL6529243.1 chromate efflux transporter [Chthoniobacterales bacterium] | diamond | 111 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 29598313 | 29598313 | PRJNA1193541_P_NODE_9850_length_280_cov_1.487923_g9712_i0 | PRJNA1193541 | 9850 | 280 | 1.487923 | 4.1661844 | Isosphaeraceae bacterium | 2691532 | Bacteria | Bacteria | 62.4 | 1.98e-9 | NR | HWE35819.1 | 2691532 | g9712 | i0 | 69.2 | 0.417857142857143 | 39 | 12 | 41.8 | 0 | 8 | 124 | 155 | 193 | HWE35819.1 TetR family transcriptional regulator C-terminal domain-containing protein [Isosphaeraceae bacterium] | diamond | 117 | 62.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium | ||
| 31209347 | 31209347 | PRJNA1193541_P_NODE_13295_length_247_cov_0.885057_g13157_i0 | PRJNA1193541 | 13295 | 247 | 0.885057 | 2.18609079 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 43.5 | 0.0207 | NR | MCB9846321.1 | 2026777 | g13157 | i0 | 31.1 | 0.898785425101215 | 74 | 50 | 88.7 | 1 | 7 | 225 | 130 | 203 | MCB9846321.1 MFS transporter [Phycisphaeraceae bacterium] | diamond | 222 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 31431162 | 31431162 | PRJNA1193541_P_NODE_8356_length_302_cov_0.951965_g8218_i0 | PRJNA1193541 | 8356 | 302 | 0.951965 | 2.8749343 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 43.9 | 0.0278 | NR | MFL6529243.1 | 2201154 | g8218 | i0 | 39 | 0.814569536423841 | 41 | 25 | 40.7 | 0 | 50 | 172 | 196 | 236 | MFL6529243.1 chromate efflux transporter [Chthoniobacterales bacterium] | diamond | 246 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;