RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1193541" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1193541 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28082987 28082987 PRJNA1193541_P_NODE_15145_length_241_cov_0.916667_g15007_i0 PRJNA1193541 15145 241 0.916667 2.20916747 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 75.9 4.72e-14   NR PYM92452.1 2053607 g15007 i0 45.3 2.81327800829876 75 41 93.4 0 241 17 155 229 PYM92452.1 MAG: ABC transporter substrate-binding protein [Candidatus Rokuibacteriota bacterium] diamond 678 75.9 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30357256 30357256 PRJNA1193541_P_NODE_9992_length_279_cov_0.946602_g9854_i0 PRJNA1193541 9992 279 0.946602 2.64101958 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 120 6.39e-30   NR HYH93656.1 2973664 g9854 i0 81.2 0.741935483870968 69 12 73.1 1 279 76 330 398 HYH93656.1 ABC transporter ATP-binding protein [Candidatus Saccharimonadales bacterium] diamond 207 120 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;