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contig_metadata

9 rows where bioproject = "PRJNA1192965", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 9 ✖

tax_phylum 1

  • Myxococcota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1192965 · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5423634 5423634 PRJNA1192965_P_NODE_1905_length_306_cov_1.321888_g1886_i0 PRJNA1192965 1905 306 1.321888 4.04497728 Labilithrix luteola 1391654 Bacteria Bacteria 54.7 0.008   NTclustered gi|913610804|gb|CP012333.1| 1391654 g1886 i0 100 0.0947712418300654 29 0 9 0 112 140 9099141 9099169 Labilithrix luteola strain DSM 27648, complete genome blastn 29 54.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
23272681 23272681 PRJNA1192965_P_NODE_3419_length_251_cov_0.865169_g3400_i0 PRJNA1192965 3419 251 0.865169 2.17157419 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 159 1.81e-44   NR MBI1947140.1 2026735 g3400 i0 89.2 12.8964143426295 83 9 99.2 0 251 3 379 461 MBI1947140.1 NADP-dependent isocitrate dehydrogenase [Deltaproteobacteria bacterium] diamond 3237 159 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27565142 27565142 PRJNA1192965_P_NODE_4204_length_246_cov_0.890173_g4185_i0 PRJNA1192965 4204 246 0.890173 2.18982558 Pseudomonadati 3379134 Bacteria Bacteria 42.7 0.0286   NR MBW1824299.1 2026735 g4185 i0 55.9 1.13414634146341 34 12 41.5 1 174 73 27 57 MBW1824299.1 DUF4203 domain-containing protein [Deltaproteobacteria bacterium] diamond 279 42.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28051467 28051467 PRJNA1192965_P_NODE_2805_length_266_cov_1.378238_g2786_i0 PRJNA1192965 2805 266 1.378238 3.66611308 Myxococcota bacterium 2818507 Bacteria Bacteria 42 0.0348   NR MFT4624923.1 2818507 g2786 i0 43.1 0.81203007518797 72 33 78.9 4 56 265 5 70 MFT4624923.1 ubiquinone/menaquinone biosynthesis C-methylase UbiE [Myxococcota bacterium] diamond 216 42 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28808952 28808952 PRJNA1192965_P_NODE_3608_length_249_cov_5.227273_g3589_i0 PRJNA1192965 3608 249 5.227273 13.01590977 Myxococcales bacterium 2026763 Bacteria Bacteria 49.3 1.35e-4   NR MCA9634375.1 2026763 g3589 i0 49.1 0.686746987951807 57 28 67.5 1 82 249 57 113 MCA9634375.1 hypothetical protein [Myxococcales bacterium] diamond 171 49.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28999087 28999087 PRJNA1192965_P_NODE_5208_length_241_cov_0.916667_g5189_i0 PRJNA1192965 5208 241 0.916667 2.20916747 Myxococcota bacterium 2818507 Bacteria Bacteria 50.1 9.77e-5   NR MDX9722326.1 2818507 g5189 i0 37.6 1.05809128630705 85 42 95.9 4 4 234 700 781 MDX9722326.1 hypothetical protein [Myxococcota bacterium] diamond 255 50.1 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
30514692 30514692 PRJNA1192965_P_NODE_2473_length_279_cov_1.412621_g2454_i0 PRJNA1192965 2473 279 1.412621 3.94121259 Polyangiales bacterium 3034171 Bacteria Bacteria 76.6 6.73e-14   NR MFO0649778.1 3034171 g2454 i0 46 0.935483870967742 87 47 93.5 0 261 1 165 251 MFO0649778.1 TlpA disulfide reductase family protein [Polyangiales bacterium] diamond 261 76.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
31526241 31526241 PRJNA1192965_P_NODE_1396_length_344_cov_1.055351_g1377_i0 PRJNA1192965 1396 344 1.055351 3.63040744 Myxococcales bacterium 2026763 Bacteria Bacteria 89.7 3.52e-18   NR MBL8606644.1 2026763 g1377 i0 44.8 1.71802325581395 105 57 90.7 1 338 27 330 434 MBL8606644.1 hypothetical protein [Myxococcales bacterium] diamond 591 89.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32538713 32538713 PRJNA1192965_P_NODE_4479_length_245_cov_0.866279_g4460_i0 PRJNA1192965 4479 245 0.866279 2.12238355 Myxococcaceae bacterium 2484252 Bacteria Bacteria 124 7.43e-34   NR RYZ16037.1 2484252 g4460 i0 74.1 0.991836734693878 81 21 99.2 0 1 243 50 130 RYZ16037.1 MAG: formate--tetrahydrofolate ligase [Myxococcaceae bacterium] diamond 243 124 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;