RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1192965" and tax_phylum = "Candidatus Harrisoniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Harrisoniibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA1192965 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32412037 32412037 PRJNA1192965_P_NODE_4659_length_244_cov_0.900585_g4640_i0 PRJNA1192965 4659 244 0.900585 2.1974274 Candidatus Harrisonbacteria bacterium CG1 2528272 Bacteria Bacteria 56.6 4.81e-7   NR PIT92124.1 1974584 g4640 i0 41.5 0.799180327868853 65 37 78.7 1 198 7 219 283 PIT92124.1 MAG: hypothetical protein COU08_04230 [Candidatus Harrisonbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_42_17] diamond 195 56.6 1 Bacteria Bacteria candidate phyla   Candidatus Harrisoniibacteriota         Candidatus Harrisonbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_42_17

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;