RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1192965", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1192965 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31052098 31052098 PRJNA1192965_P_NODE_2335_length_285_cov_0.811321_g2316_i0 PRJNA1192965 2335 285 0.811321 2.31226485 Diadema antillarum 105358 Echinodermata other_Eukaryota 83.2 3.93e-16   NR XP_071480560.1 105358 g2316 i0 56.5 2.61052631578947 69 30 72.6 0 1 207 597 665 XP_071480560.1 ATP-dependent translocase ABCB1-like [Diadema antillarum] diamond 744 83.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
32714995 32714995 PRJNA1192965_P_NODE_2240_length_288_cov_1.283721_g2221_i0 PRJNA1192965 2240 288 1.283721 3.69711648 Metazoa 33208 Echinodermata other_Eukaryota 132 5.93e-34   NR XP_038044202.1 46514 g2221 i0 65.3 19.6875 95 33 99 0 287 3 273 367 XP_038044202.1 probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Patiria miniata] diamond 5670 132 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;