RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1192965", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1192965 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27767533 27767533 PRJNA1192965_P_NODE_5304_length_229_cov_2.615385_g5285_i0 PRJNA1192965 5304 229 2.615385 5.98923165 Helobdella robusta 6412 Annelida Annelida 53.1 6.44e-6   NR XP_009027843.1 6412 g5285 i0 54.2 1.61135371179039 48 22 62.9 0 84 227 87 134 XP_009027843.1 hypothetical protein HELRODRAFT_186040 [Helobdella robusta] diamond 369 53.1 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
28493630 28493630 PRJNA1192965_P_NODE_3587_length_250_cov_0.870056_g3568_i0 PRJNA1192965 3587 250 0.870056 2.17514 Lamellibrachia satsuma 104711 Annelida Annelida 71.2 3.74e-12   NR KAI0214390.1 104711 g3568 i0 37.7 1.548 69 43 82.8 0 43 249 386 454 KAI0214390.1 Choline transporter-like protein 1 [Lamellibrachia satsuma] diamond 387 71.2 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma
28620022 28620022 PRJNA1192965_P_NODE_5287_length_232_cov_2.421384_g5268_i0 PRJNA1192965 5287 232 2.421384 5.61761088 Owenia fusiformis 6347 Annelida Annelida 60.8 9.97e-9   NR CAH1780818.1 6347 g5268 i0 40.4 0.737068965517241 57 34 73.7 0 174 4 7 63 CAH1780818.1 unnamed protein product [Owenia fusiformis] diamond 171 60.8 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;