contig_metadata
13 rows where bioproject = "PRJNA1192965", tax_kingdom = "Bacillati" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1042364 | 1042364 | PRJNA1192965_P_NODE_1_length_3180_cov_34.790795_g0_i0 | PRJNA1192965 | 1 | 3180 | 34.790795 | 1106.347281 | Ruminococcus sp. XPD3 | 41978 | Bacteria | Bacteria | 1895 | 0 | NR | WP_075424065.1 | 1452269 | g0 | i0 | 100 | 0.911320754716981 | 966 | 0 | 91.1 | 0 | 2997 | 100 | 2 | 967 | WP_075424065.1 type VI-D CRISPR-associated RNA-guided ribonuclease Cas13d [Ruminococcus sp. XPD3002] | diamond | 2898 | 1895 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Ruminococcus | Ruminococcus sp. XPD3002 | ||
| 4870465 | 4870465 | PRJNA1192965_P_NODE_4424_length_245_cov_0.895349_g4405_i0 | PRJNA1192965 | 4424 | 245 | 0.895349 | 2.19360505 | Lactobacillus | 1578 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|2096299657|gb|CP083392.1| | 47770 | g4405 | i0 | 100 | 426.040816326531 | 245 | 0 | 100 | 0 | 1 | 245 | 90557 | 90801 | Lactobacillus crispatus strain Lc1226 chromosome, complete genome | blastn | 104380 | 453 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus crispatus | ||
| 6145220 | 6145220 | PRJNA1192965_P_NODE_3345_length_251_cov_0.865169_g3326_i0 | PRJNA1192965 | 3345 | 251 | 0.865169 | 2.17157419 | Staphylococcus | 1279 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|2482395019|gb|CP094927.1| | 1280 | g3326 | i0 | 100 | 100 | 251 | 0 | 100 | 0 | 1 | 251 | 307609 | 307359 | Staphylococcus aureus strain 13 chromosome, complete genome | blastn | 25100 | 464 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 8695387 | 8695387 | PRJNA1192965_P_NODE_1087_length_377_cov_1.523026_g1068_i0 | PRJNA1192965 | 1087 | 377 | 1.523026 | 5.74180802 | Staphylococcus | 1279 | Bacteria | Bacteria | 680 | 0 | NTclustered | gi|2451579829|gb|CP118060.1| | 1283 | g1068 | i0 | 99.204 | 466.262599469496 | 377 | 3 | 100 | 0 | 1 | 377 | 855976 | 855600 | Staphylococcus haemolyticus strain VSI35 chromosome, complete genome | blastn | 175781 | 680 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus haemolyticus | ||
| 18172127 | 18172127 | PRJNA1192965_P_NODE_4415_length_245_cov_0.895349_g4396_i0 | PRJNA1192965 | 4415 | 245 | 0.895349 | 2.19360505 | Finegoldia magna | 1260 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|2127667581|gb|CP085957.1| | 1260 | g4396 | i0 | 100 | 648.955102040816 | 245 | 0 | 100 | 0 | 1 | 245 | 162671 | 162427 | Finegoldia magna strain FDAARGOS_1556 chromosome, complete genome | blastn | 158994 | 453 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Finegoldia | Finegoldia magna | ||
| 19446537 | 19446537 | PRJNA1192965_P_NODE_2716_length_269_cov_1.719388_g2697_i0 | PRJNA1192965 | 2716 | 269 | 1.719388 | 4.62515372 | Staphylococcus warneri | 1292 | Bacteria | Bacteria | 488 | 1.5799999999999998e-133 | NTclustered | gi|1714036495|gb|CP031269.1| | 1292 | g2697 | i0 | 99.625 | 474.323420074349 | 267 | 1 | 99 | 0 | 1 | 267 | 2316137 | 2315871 | Staphylococcus warneri strain 16A chromosome, complete genome | blastn | 127593 | 488 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 22719223 | 22719223 | PRJNA1192965_P_NODE_1898_length_306_cov_2.244635_g1879_i0 | PRJNA1192965 | 1898 | 306 | 2.244635 | 6.8685831 | Bacillales | 1385 | Bacteria | Bacteria | 566 | 8.239999999999998e-157 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g1879 | i0 | 100 | 533.915032679739 | 306 | 0 | 100 | 0 | 1 | 306 | 750199 | 749894 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 163378 | 566 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 30546296 | 30546296 | PRJNA1192965_P_NODE_3793_length_248_cov_1.468571_g3774_i0 | PRJNA1192965 | 3793 | 248 | 1.468571 | 3.64205608 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 72.4 | 1.25e-12 | NR | MBR0463171.1 | 2044939 | g3774 | i0 | 52.6 | 4.65725806451613 | 76 | 30 | 85.9 | 3 | 36 | 248 | 222 | 296 | MBR0463171.1 glycoside hydrolase family 125 protein [Clostridia bacterium] | diamond | 1155 | 72.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 31620919 | 31620919 | PRJNA1192965_P_NODE_2916_length_262_cov_1.629630_g2897_i0 | PRJNA1192965 | 2916 | 262 | 1.62963 | 4.2696306 | unclassified Oceanobacillus | 2630292 | Bacteria | Bacteria | 42.7 | 0.0453 | NR | WP_156858045.1 | 2630292 | g2897 | i0 | 30.6 | 0.709923664122137 | 62 | 43 | 71 | 0 | 234 | 49 | 149 | 210 | WP_156858045.1 MULTISPECIES: ribosome biogenesis GTPase YqeH [unclassified Oceanobacillus] | diamond | 186 | 42.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Oceanobacillus | |||
| 31652423 | 31652423 | PRJNA1192965_P_NODE_4057_length_247_cov_0.885057_g4038_i0 | PRJNA1192965 | 4057 | 247 | 0.885057 | 2.18609079 | Bacilli bacterium | 1903720 | Bacteria | Bacteria | 42 | 0.0235 | NR | GHU29446.1 | 1903720 | g4038 | i0 | 37.5 | 0.777327935222672 | 64 | 32 | 71.7 | 4 | 198 | 22 | 4 | 64 | GHU29446.1 hypothetical protein FACS1894152_7770 [Bacilli bacterium] | diamond | 192 | 42 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacilli bacterium | |||||
| 31779030 | 31779030 | PRJNA1192965_P_NODE_1157_length_369_cov_4.905405_g1138_i0 | PRJNA1192965 | 1157 | 369 | 4.905405 | 18.10094445 | Brevibacillus fulvus | 1125967 | Bacteria | Bacteria | 137 | 3.71e-39 | NR | WP_204516782.1 | 1125967 | g1138 | i0 | 61.7 | 0.869918699186992 | 107 | 41 | 87 | 0 | 41 | 361 | 2 | 108 | WP_204516782.1 group I truncated hemoglobin [Brevibacillus fulvus] | diamond | 321 | 137 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Brevibacillus | Brevibacillus fulvus | ||
| 31873985 | 31873985 | PRJNA1192965_P_NODE_2997_length_259_cov_1.956989_g2978_i0 | PRJNA1192965 | 2997 | 259 | 1.956989 | 5.06860151 | Bacilli bacterium | 1903720 | Bacteria | Bacteria | 120 | 7.2e-30 | NR | MBP3799570.1 | 1903720 | g2978 | i0 | 66.3 | 1.93436293436293 | 83 | 28 | 96.1 | 0 | 6 | 254 | 102 | 184 | MBP3799570.1 dynamin family protein [Bacilli bacterium] | diamond | 501 | 120 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacilli bacterium | |||||
| 32063787 | 32063787 | PRJNA1192965_P_NODE_1278_length_356_cov_1.088339_g1259_i0 | PRJNA1192965 | 1278 | 356 | 1.088339 | 3.87448684 | Symbiobacteriaceae bacterium | 2602712 | Bacteria | Bacteria | 109 | 4.07e-26 | NR | MDF2629472.1 | 2602712 | g1259 | i0 | 44.4 | 0.985955056179775 | 117 | 62 | 98.6 | 2 | 352 | 2 | 38 | 151 | MDF2629472.1 zinc-binding dehydrogenase [Symbiobacteriaceae bacterium] | diamond | 351 | 109 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Symbiobacteriaceae | Symbiobacteriaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;