RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1192965", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1192965 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2871289 2871289 PRJNA1192965_P_NODE_3983_length_247_cov_0.885057_g3964_i0 PRJNA1192965 3983 247 0.885057 2.18609079 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 94 3.8e-20   NR BBI54964.1 227086 g3964 i0 67.7 0.753036437246964 62 20 75.3 0 2 187 1190 1251 BBI54964.1 plastid-targeted DNA polymerase [Bigelowiella natans] diamond 186 94 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
31968865 31968865 PRJNA1192965_P_NODE_3538_length_250_cov_0.870056_g3519_i0 PRJNA1192965 3538 250 0.870056 2.17514 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 49.7 1.48e-4   NR MES1910542.1 1215613 g3519 i0 57.6 0.396 33 14 39.6 0 150 248 3072 3104 MES1910542.1 hypothetical protein [Cercozoa sp. M6MM] diamond 99 49.7 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;