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contig_metadata

13 rows where bioproject = "PRJNA1192965" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 13 ✖

bioproject 1

  • PRJNA1192965 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9248416 9248416 PRJNA1192965_P_NODE_1348_length_350_cov_1.021661_g1329_i0 PRJNA1192965 1348 350 1.021661 3.5758135 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 189 3.5099999999999994e-57   NR XP_004344643.1 1257118 g1329 i0 74.1 2.98285714285714 116 30 99.4 0 1 348 31 146 XP_004344643.1 MC family transporter: phosphate, putative [Acanthamoeba castellanii str. Neff] diamond 1044 189 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18893843 18893843 PRJNA1192965_P_NODE_2235_length_288_cov_1.432558_g2216_i0 PRJNA1192965 2235 288 1.432558 4.12576704 Evosea 2605435 Evosea other_Eukaryota 117 5.209999999999999e-32   NR KAF2076753.1 133409 g2216 i0 67.1 15.1458333333333 79 26 82.3 0 283 47 1 79 KAF2076753.1 hypothetical protein CYY_001942 [Polysphondylium violaceum] diamond 4362 117 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
19446530 19446530 PRJNA1192965_P_NODE_2136_length_293_cov_1.750000_g2117_i0 PRJNA1192965 2136 293 1.75 5.1275 Platyamoeba placida 3454475 Discosea other_Eukaryota 392 1.41e-104   NTclustered gi|33946348|gb|AY294153.1| 197527 g2117 i0 90.785 92.2491467576792 293 27 100 0 1 293 1050 758 Platyamoeba placida actin mRNA, partial cds blastn 27029 392 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
26819373 26819373 PRJNA1192965_P_NODE_4041_length_247_cov_0.885057_g4022_i0 PRJNA1192965 4041 247 0.885057 2.18609079 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 94 3.61e-20   NR PRP82197.1 1890364 g4022 i0 56.3 0.97165991902834 80 35 97.2 0 242 3 663 742 PRP82197.1 hypothetical protein PROFUN_10406 [Planoprotostelium fungivorum] diamond 240 94 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27122691 27122691 PRJNA1192965_P_NODE_2382_length_283_cov_1.100000_g2363_i0 PRJNA1192965 2382 283 1.1 3.113 Eumycetozoa 142796 Evosea other_Eukaryota 108 4.660000000000001e-27   NR KAF2074121.1 133409 g2363 i0 52.2 3.6678445229682 90 43 95.4 0 1 270 94 183 KAF2074121.1 hypothetical protein CYY_004563 [Polysphondylium violaceum] diamond 1038 108 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
28620019 28620019 PRJNA1192965_P_NODE_3427_length_251_cov_0.865169_g3408_i0 PRJNA1192965 3427 251 0.865169 2.17157419 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 57.4 2.33e-7   NR XP_004338074.1 1257118 g3408 i0 83.3 0.430278884462151 36 6 43 0 109 2 172 207 XP_004338074.1 TolAlike protein [Acanthamoeba castellanii str. Neff] diamond 108 57.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29819434 29819434 PRJNA1192965_P_NODE_3271_length_251_cov_0.865169_g3252_i0 PRJNA1192965 3271 251 0.865169 2.17157419 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 92.8 6.11e-20   NR XP_004338165.1 1257118 g3252 i0 49.4 0.99203187250996006 83 42 99.2 0 250 2 123 205 XP_004338165.1 CDPalcohol phosphatidyltransferase superfamily protein [Acanthamoeba castellanii str. Neff] diamond 249 92.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30925673 30925673 PRJNA1192965_P_NODE_3214_length_252_cov_1.720670_g3195_i0 PRJNA1192965 3214 252 1.72067 4.3360884 Entamoeba dispar SAW76 46681 Evosea other_Eukaryota 79.7 2.01e-16   NR XP_001735418.1 370354 g3195 i0 46.4 1 84 45 100 0 252 1 20 103 XP_001735418.1 60S ribosomal protein L18A, putative [Entamoeba dispar SAW760] diamond 252 79.7 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
31020309 31020309 PRJNA1192965_P_NODE_1355_length_349_cov_1.090580_g1336_i0 PRJNA1192965 1355 349 1.09058 3.8061242 Entamoeba dispar SAW76 46681 Evosea other_Eukaryota 49.7 4.45e-4   NR XP_001737935.1 370354 g1336 i0 32.3 0.799426934097421 93 57 79.1 4 347 72 551 638 XP_001737935.1 uncharacterized protein EDI_307930, partial [Entamoeba dispar SAW760] diamond 279 49.7 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
31450360 31450360 PRJNA1192965_P_NODE_4616_length_244_cov_0.900585_g4597_i0 PRJNA1192965 4616 244 0.900585 2.1974274 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 74.3 2.91e-13   NR XP_004349737.1 1257118 g4597 i0 62.9 1.61065573770492 62 20 76.2 1 19 204 908 966 XP_004349737.1 helicase conserved Cterminal domain containing protein [Acanthamoeba castellanii str. Neff] diamond 393 74.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32082845 32082845 PRJNA1192965_P_NODE_3358_length_251_cov_0.865169_g3339_i0 PRJNA1192965 3358 251 0.865169 2.17157419 Dictyostelium 5782 Evosea other_Eukaryota 74.7 2.28e-13   NR CAA68685.1 44689 g3339 i0 47.4 1.86454183266932 78 40 93.2 1 236 3 727 803 CAA68685.1 unnamed protein product [Dictyostelium discoideum] diamond 468 74.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
32254045 32254045 PRJNA1192965_P_NODE_2238_length_288_cov_1.390698_g2219_i0 PRJNA1192965 2238 288 1.390698 4.00521024 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 45.4 0.00111   NR PRP89373.1 1890364 g2219 i0 53.3 0.46875 45 21 46.9 0 255 121 4 48 PRP89373.1 hypothetical protein PROFUN_01236 [Planoprotostelium fungivorum] diamond 135 45.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32412036 32412036 PRJNA1192965_P_NODE_3439_length_250_cov_1.779661_g3420_i0 PRJNA1192965 3439 250 1.779661 4.4491525 Polysphondylium violaceum 133409 Evosea other_Eukaryota 72 1.81e-13   NR KAF2071651.1 133409 g3420 i0 45.8 0.996 83 43 99.6 1 250 2 91 171 KAF2071651.1 hypothetical protein CYY_007026 [Polysphondylium violaceum] diamond 249 72 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;