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contig_metadata

12 rows where bioproject = "PRJNA1188114" and tax_phylum = "Myxococcota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1188114 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7973278 7973278 PRJNA1188114_P_NODE_17667_length_162_cov_2.238938_g17615_i0 PRJNA1188114 17667 162 2.238938 3.62707956 Cystobacter fuscus 43 Bacteria Bacteria 110 7.89e-20   NTclustered gi|2579665545|gb|CP043492.1| 43 g17615 i0 80.42 2.65432098765432 143 28 88 0 15 157 2528628 2528770 Cystobacter fuscus strain Cbf 8 chromosome, complete genome blastn 430 110 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Cystobacter Cystobacter fuscus
14349065 14349065 PRJNA1188114_P_NODE_3052_length_249_cov_1.530000_g3000_i0 PRJNA1188114 3052 249 1.53 3.8097 Pseudomonadati 3379134 Bacteria Bacteria 115 4.4699999999999995e-30   NR MSP25910.1 2026763 g3000 i0 78.1 4.43373493975904 64 13 75.9 1 249 61 129 192 MSP25910.1 superoxide dismutase [Myxococcales bacterium] diamond 1104 115 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
15622749 15622749 PRJNA1188114_P_NODE_16773_length_163_cov_0.894737_g16721_i0 PRJNA1188114 16773 163 0.894737 1.45842131 Polyangiaceae bacterium 2268199 Bacteria Bacteria 99.4 5.5e-24   NR HEY5372787.1 2268199 g16721 i0 90.7 6.95705521472393 54 5 99.4 0 163 2 10 63 HEY5372787.1 PLP-dependent transferase [Polyangiaceae bacterium] diamond 1134 99.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
21444010 21444010 PRJNA1188114_P_NODE_11917_length_167_cov_1.728814_g11865_i0 PRJNA1188114 11917 167 1.728814 2.88711938 Myxococcus 32 Bacteria Bacteria 259 7.69e-65   NTclustered gi|2869653495|gb|CP175551.1| 33 g11865 i0 94.611 40.1556886227545 167 9 100 0 1 167 3311143 3311309 Myxococcus fulvus strain KYC1117 chromosome, complete genome blastn 6706 259 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Myxococcus Myxococcus fulvus
28367094 28367094 PRJNA1188114_P_NODE_19726_length_161_cov_0.910714_g19674_i0 PRJNA1188114 19726 161 0.910714 1.46624954 Labilithrix sp. 1971228 Bacteria Bacteria 75.9 9.5e-15   NR HSO39300.1 1971228 g19674 i0 68.4 1.06211180124224 57 11 93.2 3 152 3 1 57 HSO39300.1 HEAT repeat domain-containing protein [Labilithrix sp.] diamond 171 75.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
28493624 28493624 PRJNA1188114_P_NODE_9187_length_178_cov_2.224806_g9135_i0 PRJNA1188114 9187 178 2.224806 3.96015468 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 61.2 3.97e-9   NR MCB9735544.1 2026735 g9135 i0 50 0.97752808988764 58 29 97.8 0 1 174 126 183 MCB9735544.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 174 61.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28840730 28840730 PRJNA1188114_P_NODE_12248_length_167_cov_0.864407_g12196_i0 PRJNA1188114 12248 167 0.864407 1.44355969 Kofleriaceae bacterium 2212474 Bacteria Bacteria 92 4.15e-20   NR HEY1550680.1 2212474 g12196 i0 66 1.92215568862275 53 18 95.2 0 2 160 46 98 HEY1550680.1 GTPase domain-containing protein [Kofleriaceae bacterium] diamond 321 92 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
29427938 29427938 PRJNA1188114_P_NODE_18549_length_162_cov_0.902655_g18497_i0 PRJNA1188114 18549 162 0.902655 1.4623011 Myxococcia 32015 Bacteria Bacteria 104 5.22e-25   NR MBA3503974.1 2026735 g18497 i0 92.6 15 54 4 100 0 162 1 41 94 MBA3503974.1 aldehyde dehydrogenase [Deltaproteobacteria bacterium] diamond 2430 105 0.990476190476191 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31052085 31052085 PRJNA1188114_P_NODE_4675_length_210_cov_2.534161_g4623_i0 PRJNA1188114 4675 210 2.534161 5.3217381 Myxococcales bacterium 2026763 Bacteria Bacteria 65.9 1.67e-10   NR MCA9562013.1 2026763 g4623 i0 78.1 8.57142857142857 32 7 45.7 0 113 208 25 56 MCA9562013.1 transketolase [Myxococcales bacterium] diamond 1800 65.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31177914 31177914 PRJNA1188114_P_NODE_9775_length_176_cov_1.503937_g9723_i0 PRJNA1188114 9775 176 1.503937 2.64692912 Bradymonadia bacterium 3121696 Bacteria Bacteria 44.3 0.00432   NR MFT5992599.1 3121696 g9723 i0 48.1 0.886363636363636 52 22 88.6 1 6 161 284 330 MFT5992599.1 hypothetical protein [Bradymonadia bacterium] diamond 156 44.3 1 Bacteria   Pseudomonadati Myxococcota Bradymonadia       Bradymonadia bacterium
31842227 31842227 PRJNA1188114_P_NODE_14397_length_165_cov_0.879310_g14345_i0 PRJNA1188114 14397 165 0.87931 1.4508615 Polyangiaceae bacterium 2268199 Bacteria Bacteria 53.1 2.82e-6   NR HQP36693.1 2268199 g14345 i0 58.1 4 43 18 78.2 0 1 129 523 565 HQP36693.1 hypothetical protein [Polyangiaceae bacterium] diamond 660 53.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32190485 32190485 PRJNA1188114_P_NODE_18238_length_162_cov_0.902655_g18186_i0 PRJNA1188114 18238 162 0.902655 1.4623011 Myxococcales bacterium 2026763 Bacteria Bacteria 58.5 3.19e-8   NR MBT9561153.1 2026763 g18186 i0 48.1 1 54 28 100 0 1 162 38 91 MBT9561153.1 hypothetical protein [Myxococcales bacterium] diamond 162 58.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;