contig_metadata
14 rows where bioproject = "PRJNA1188114", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1594701 | 1594701 | PRJNA1188114_P_NODE_2282_length_283_cov_1.760684_g2230_i0 | PRJNA1188114 | 2282 | 283 | 1.760684 | 4.98273572 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 344 | 3.85e-90 | NTclustered | gi|2258818259|gb|CP060220.1| | 2026715 | g2230 | i0 | 88.732 | 176.102473498233 | 284 | 29 | 100 | 3 | 1 | 283 | 3251161 | 3250880 | MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome | blastn | 49837 | 344 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 16344610 | 16344610 | PRJNA1188114_P_NODE_14333_length_165_cov_1.301724_g14281_i0 | PRJNA1188114 | 14333 | 165 | 1.301724 | 2.1478446 | Peredibacter | 263370 | Bacteria | Bacteria | 265 | 1.6299999999999998e-66 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g14281 | i0 | 95.732 | 144.181818181818 | 164 | 7 | 99 | 0 | 2 | 165 | 512519 | 512356 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 23790 | 265 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 20168425 | 20168425 | PRJNA1188114_P_NODE_8256_length_182_cov_2.759398_g8204_i0 | PRJNA1188114 | 8256 | 182 | 2.759398 | 5.02210436 | Bdellovibrio | 958 | Bacteria | Bacteria | 252 | 1.42e-62 | NTclustered | gi|1210342126|gb|CP020946.1| | 959 | g8204 | i0 | 91.803 | 381.32967032967 | 183 | 11 | 100 | 3 | 1 | 182 | 2950414 | 2950235 | Bdellovibrio bacteriovorus strain SSB218315, complete genome | blastn | 69402 | 252 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 23272236 | 23272236 | PRJNA1188114_P_NODE_7499_length_185_cov_2.117647_g7447_i0 | PRJNA1188114 | 7499 | 185 | 2.117647 | 3.91764695 | Bacteriovorax sp. HI3 | 2984118 | Bacteria | Bacteria | 195 | 2.48e-45 | NTclustered | gi|2321225508|dbj|AP026946.1| | 2984118 | g7447 | i0 | 88.272 | 0.875675675675676 | 162 | 19 | 88 | 0 | 16 | 177 | 865831 | 865670 | Bacteriovorax sp. HI3 DNA, complete genome | blastn | 162 | 195 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax sp. HI3 | ||
| 26870214 | 26870214 | PRJNA1188114_P_NODE_12321_length_167_cov_0.864407_g12269_i0 | PRJNA1188114 | 12321 | 167 | 0.864407 | 1.44355969 | Bacteria | 2 | Bacteria | Bacteria | 52.8 | 9.11e-7 | NR | HVK62641.1 | 2053517 | g12269 | i0 | 52.9 | 1.54491017964072 | 51 | 24 | 91.6 | 0 | 166 | 14 | 73 | 123 | HVK62641.1 ExbD/TolR family protein [Bdellovibrionales bacterium] | diamond | 258 | 53.1 | 0.994350282485876 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28462168 | 28462168 | PRJNA1188114_P_NODE_19426_length_161_cov_0.910714_g19374_i0 | PRJNA1188114 | 19426 | 161 | 0.910714 | 1.46624954 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 70.1 | 6.85e-13 | NR | WP_321390019.1 | 28202 | g19374 | i0 | 54.7 | 0.987577639751553 | 53 | 24 | 98.8 | 0 | 1 | 159 | 102 | 154 | WP_321390019.1 hypothetical protein [Peredibacter starrii] | diamond | 159 | 70.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 29219871 | 29219871 | PRJNA1188114_P_NODE_17009_length_163_cov_0.894737_g16957_i0 | PRJNA1188114 | 17009 | 163 | 0.894737 | 1.45842131 | Oligoflexales bacterium | 2687297 | Bacteria | Bacteria | 44.7 | 0.00188 | NR | MBP9708211.1 | 2687297 | g16957 | i0 | 55.3 | 0.699386503067485 | 38 | 17 | 69.9 | 0 | 46 | 159 | 5 | 42 | MBP9708211.1 CYTH domain-containing protein [Oligoflexales bacterium] | diamond | 114 | 44.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Oligoflexales bacterium | ||||
| 29882992 | 29882992 | PRJNA1188114_P_NODE_18991_length_161_cov_1.651786_g18939_i0 | PRJNA1188114 | 18991 | 161 | 1.651786 | 2.65937546 | Bdellovibrio bacteriovorus str. Tiberius | 1069642 | Bacteria | Bacteria | 84 | 9.6e-19 | NR | AFY02568.1 | 1069642 | g18939 | i0 | 79.2 | 1.95652173913043 | 53 | 11 | 98.8 | 0 | 3 | 161 | 79 | 131 | AFY02568.1 30S ribosomal protein S4 [Bdellovibrio bacteriovorus str. Tiberius] | diamond | 315 | 84 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 30135194 | 30135194 | PRJNA1188114_P_NODE_17412_length_163_cov_0.894737_g17360_i0 | PRJNA1188114 | 17412 | 163 | 0.894737 | 1.45842131 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 55.1 | 5.51e-7 | NR | MBS1984190.1 | 2053517 | g17360 | i0 | 51.9 | 0.957055214723926 | 52 | 25 | 95.7 | 0 | 2 | 157 | 101 | 152 | MBS1984190.1 DsbA family protein [Bdellovibrionales bacterium] | diamond | 156 | 55.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 31177912 | 31177912 | PRJNA1188114_P_NODE_5495_length_198_cov_2.946309_g5443_i0 | PRJNA1188114 | 5495 | 198 | 2.946309 | 5.83369182 | Bacteriovorax sp. | 2608087 | Bacteria | Bacteria | 98.6 | 1.26e-23 | NR | MBC7427495.1 | 2608087 | g5443 | i0 | 70.8 | 0.984848484848485 | 65 | 18 | 97 | 1 | 7 | 198 | 96 | 160 | MBC7427495.1 cyclase family protein [Bacteriovorax sp.] | diamond | 195 | 98.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax sp. | ||
| 31747391 | 31747391 | PRJNA1188114_P_NODE_15717_length_164_cov_0.886957_g15665_i0 | PRJNA1188114 | 15717 | 164 | 0.886957 | 1.45460948 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 53.9 | 4.44e-7 | NR | MFN8790961.1 | 2053517 | g15665 | i0 | 89.3 | 0.51219512195122 | 28 | 3 | 51.2 | 0 | 1 | 84 | 132 | 159 | MFN8790961.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 84 | 53.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 32095473 | 32095473 | PRJNA1188114_P_NODE_13058_length_166_cov_1.743590_g13006_i0 | PRJNA1188114 | 13058 | 166 | 1.74359 | 2.8943594 | Silvanigrellales bacterium | 2767476 | Bacteria | Bacteria | 75.1 | 4.94e-14 | NR | MCA2959564.1 | 2767476 | g13006 | i0 | 72.2 | 0.975903614457831 | 54 | 15 | 97.6 | 0 | 3 | 164 | 636 | 689 | MCA2959564.1 HAMP domain-containing protein [Silvanigrellales bacterium] | diamond | 162 | 75.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellales bacterium | ||||
| 32095475 | 32095475 | PRJNA1188114_P_NODE_19898_length_161_cov_0.910714_g19846_i0 | PRJNA1188114 | 19898 | 161 | 0.910714 | 1.46624954 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 55.8 | 2.9e-7 | NR | MBS1969780.1 | 2053517 | g19846 | i0 | 63 | 0.857142857142857 | 46 | 17 | 85.7 | 0 | 144 | 7 | 1067 | 1112 | MBS1969780.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 138 | 55.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 32462717 | 32462717 | PRJNA1188114_P_NODE_18159_length_162_cov_0.902655_g18107_i0 | PRJNA1188114 | 18159 | 162 | 0.902655 | 1.4623011 | Pseudobdellovibrionaceae | 213483 | Bacteria | Bacteria | 99.4 | 1.4100000000000001e-22 | NR | AZZ35915.1 | 1916293 | g18107 | i0 | 83 | 1.94444444444444 | 53 | 9 | 98.1 | 0 | 161 | 3 | 354 | 406 | AZZ35915.1 type I DNA topoisomerase [Bdellovibrio sp. qaytius] | diamond | 315 | 99.8 | 0.995991983967936 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;