RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1188114", tax_kingdom = "Pararnavirae" and tax_phylum = "Artverviricota"

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tax_superkingdom 1

tax_phylum 1

  • Artverviricota · 2 ✖

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA1188114 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31797942 31797942 PRJNA1188114_P_NODE_357_length_730_cov_2.767988_g310_i0 PRJNA1188114 357 730 2.767988 20.2063124 Gammaretrovirus 153135 Viruses Viruses 506 2.39e-164   NR ARB03489.1 11786 g310 i0 98.8 10.9849315068493 243 3 99.9 0 730 2 747 989 ARB03489.1 putative gag-pro-pol polyprotein [Murine leukemia virus] diamond 8019 511 0.990215264187867 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
32317307 32317307 PRJNA1188114_P_NODE_1299_length_377_cov_1.643293_g1247_i0 PRJNA1188114 1299 377 1.643293 6.19521461 Moloney murine leukemia virus 11801 Viruses Viruses 256 3.98e-76   NR NP_057933.2 11801 g1247 i0 100 4.97347480106101 125 0 99.5 0 3 377 1048 1172 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 1875 256 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;