RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1188114", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 6 ✖

tax_kingdom 1

  • Metazoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1188114 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4146894 4146894 PRJNA1188114_P_NODE_15864_length_164_cov_0.886957_g15812_i0 PRJNA1188114 15864 164 0.886957 1.45460948 Diadema antillarum 105358 Echinodermata other_Eukaryota 110 8.01e-20   NTclustered gi|2919519012|ref|XM_071653013.1| 105358 g15812 i0 79.866 0.908536585365854 149 30 91 0 14 162 361 213 PREDICTED: Diadema antillarum soma ferritin-like (LOC139742475), mRNA blastn 149 110 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
7973305 7973305 PRJNA1188114_P_NODE_2147_length_292_cov_2.543210_g2095_i0 PRJNA1188114 2147 292 2.54321 7.4261732 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 178 4.28e-40   NTclustered gi|1752399365|ref|XM_011667624.2| 7668 g2095 i0 83.077 77.5171232876712 195 33 67 0 57 251 583 389 PREDICTED: Strongylocentrotus purpuratus ATP synthase F(0) complex subunit C2, mitochondrial (LOC583818), mRNA blastn 22635 178 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
15622807 15622807 PRJNA1188114_P_NODE_593_length_572_cov_1.942639_g542_i0 PRJNA1188114 593 572 1.942639 11.11189508 Diadema antillarum 105358 Echinodermata other_Eukaryota 200 1.9e-46   NTclustered gi|2919362284|ref|XM_071638159.1| 105358 g542 i0 78.571 3.33391608391608 308 63 54 2 264 571 145 449 PREDICTED: Diadema antillarum small ribosomal subunit protein uS5 (LOC139727198), mRNA blastn 1907 200 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
16897178 16897178 PRJNA1188114_P_NODE_6014_length_192_cov_1.426573_g5962_i0 PRJNA1188114 6014 192 1.426573 2.73902016 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 193 9.34e-45   NTclustered gi|2037976119|ref|XM_041600467.1| 7654 g5962 i0 91.489 36.59375 141 11 73 1 53 192 450 310 PREDICTED: Lytechinus variegatus dynein light chain 2, cytoplasmic-like (LOC121408813), mRNA blastn 7026 193 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
24546106 24546106 PRJNA1188114_P_NODE_9260_length_178_cov_1.581395_g9208_i0 PRJNA1188114 9260 178 1.581395 2.8148831 Comatella stelligera 707716 Echinodermata other_Eukaryota 134 5.23e-27   NTclustered gi|2328387866|ref|NC_068252.1| 707716 g9208 i0 95.294 51.561797752809 85 3 48 1 94 178 11899 11816 Comatella stelligera mitochondrion, complete genome blastn 9178 134 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Comatella Comatella stelligera
27230342 27230342 PRJNA1188114_P_NODE_20423_length_154_cov_2.485714_g20371_i0 PRJNA1188114 20423 154 2.485714 3.82799956 Anneissia japonica 1529436 Echinodermata other_Eukaryota 47.4 2.51e-4   NR XP_033118794.1 1529436 g20371 i0 44.9 0.954545454545455 49 21 95.5 1 149 3 143 185 XP_033118794.1 ATPase MORC2-like isoform X2 [Anneissia japonica] diamond 147 47.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;