RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1188114", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1188114 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6697873 6697873 PRJNA1188114_P_NODE_1866_length_313_cov_1.742424_g1814_i0 PRJNA1188114 1866 313 1.742424 5.45378712 Mycotypha africana 64632 Fungi Fungi 56.5 0.002   NTclustered gi|2432576000|ref|XM_053074956.1| 64632 g1814 i0 100 0.0958466453674121 30 0 10 0 61 90 2066 2095 Mycotypha africana uncharacterized protein (BDF20DRAFT_226406), mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
16897077 16897077 PRJNA1188114_P_NODE_11434_length_169_cov_1.866667_g11382_i0 PRJNA1188114 11434 169 1.866667 3.15466723 Phycomyces blakesleeanus 4837 Fungi Fungi 150 4.86e-32   NTclustered gi|1069941228|ref|XM_018428823.1| 763407 g11382 i0 84.314 67.9526627218935 153 24 91 0 17 169 457 305 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 11484 150 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
28808943 28808943 PRJNA1188114_P_NODE_19588_length_161_cov_0.910714_g19536_i0 PRJNA1188114 19588 161 0.910714 1.46624954 Acaulospora morrowiae 94023 Fungi Fungi 75.1 4.73e-14   NR CAG8549603.1 94023 g19536 i0 62 1.80745341614907 50 18 91.3 1 159 13 345 394 CAG8549603.1 16490_t:CDS:10 [Acaulospora morrowiae] diamond 291 75.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Acaulosporaceae Acaulospora Acaulospora morrowiae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;