contig_metadata
10 rows where bioproject = "PRJNA1188114", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 320077 | 320077 | PRJNA1188114_P_NODE_18541_length_162_cov_0.902655_g18489_i0 | PRJNA1188114 | 18541 | 162 | 0.902655 | 1.4623011 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 169 | 1.28e-37 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g18489 | i0 | 86.452 | 14.7469135802469 | 155 | 19 | 95 | 2 | 9 | 162 | 2107147 | 2106994 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 2389 | 169 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 1594711 | 1594711 | PRJNA1188114_P_NODE_4642_length_210_cov_2.801242_g4590_i0 | PRJNA1188114 | 4642 | 210 | 2.801242 | 5.8826082 | Gemmatimonadetes bacterium T265 | 2839016 | Bacteria | Bacteria | 62 | 3.67e-9 | NR | GJG85531.1 | 2839016 | g4590 | i0 | 90.6 | 0.457142857142857 | 32 | 3 | 45.7 | 0 | 206 | 111 | 177 | 208 | GJG85531.1 type II secretion system protein F [Gemmatimonadetes bacterium T265] | diamond | 96 | 62 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadetes bacterium T265 | |||||
| 5423193 | 5423193 | PRJNA1188114_P_NODE_9285_length_178_cov_1.565891_g9233_i0 | PRJNA1188114 | 9285 | 178 | 1.565891 | 2.78728598 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 143 | 8.689999999999998e-30 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g9233 | i0 | 82.716 | 0.910112359550562 | 162 | 26 | 90 | 2 | 1 | 161 | 3794805 | 3794645 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 162 | 143 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 7973226 | 7973226 | PRJNA1188114_P_NODE_12067_length_167_cov_1.330508_g12015_i0 | PRJNA1188114 | 12067 | 167 | 1.330508 | 2.22194836 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 57 | 5.38e-8 | NR | HEX7980228.1 | 2026741 | g12015 | i0 | 53.6 | 1.0059880239521 | 56 | 25 | 98.8 | 1 | 3 | 167 | 84 | 139 | HEX7980228.1 hypothetical protein [Gemmatimonadaceae bacterium] | diamond | 168 | 57 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 14349050 | 14349050 | PRJNA1188114_P_NODE_19312_length_161_cov_0.910714_g19260_i0 | PRJNA1188114 | 19312 | 161 | 0.910714 | 1.46624954 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 121 | 3.62e-23 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g19260 | i0 | 89.474 | 1.35403726708075 | 95 | 10 | 59 | 0 | 65 | 159 | 4901141 | 4901047 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 218 | 121 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 18171559 | 18171559 | PRJNA1188114_P_NODE_13095_length_166_cov_1.589744_g13043_i0 | PRJNA1188114 | 13095 | 166 | 1.589744 | 2.63897504 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 104 | 2.23e-24 | NR | HEU5261291.1 | 2448054 | g13043 | i0 | 89.1 | 0.993975903614458 | 55 | 6 | 99.4 | 0 | 165 | 1 | 210 | 264 | HEU5261291.1 L-glutamate gamma-semialdehyde dehydrogenase [Gemmatimonadales bacterium] | diamond | 165 | 104 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 29093591 | 29093591 | PRJNA1188114_P_NODE_16868_length_163_cov_0.894737_g16816_i0 | PRJNA1188114 | 16868 | 163 | 0.894737 | 1.45842131 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 103 | 4.25e-24 | NR | HLM68793.1 | 2029185 | g16816 | i0 | 88.9 | 0.993865030674847 | 54 | 6 | 99.4 | 0 | 163 | 2 | 19 | 72 | HLM68793.1 outer membrane beta-barrel family protein [Longimicrobium sp.] | diamond | 162 | 103 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 29901967 | 29901967 | PRJNA1188114_P_NODE_18671_length_162_cov_0.902655_g18619_i0 | PRJNA1188114 | 18671 | 162 | 0.902655 | 1.4623011 | Gemmatimonadaceae | 219687 | Bacteria | Bacteria | 47.4 | 2.86e-4 | NR | WP_284348512.1 | 2014610 | g18619 | i0 | 55.8 | 1.92592592592593 | 52 | 23 | 96.3 | 0 | 158 | 3 | 160 | 211 | WP_284348512.1 EAL domain-containing protein [Roseisolibacter agri] | diamond | 312 | 47.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Roseisolibacter | Roseisolibacter agri | |
| 31052081 | 31052081 | PRJNA1188114_P_NODE_15915_length_164_cov_0.886957_g15863_i0 | PRJNA1188114 | 15915 | 164 | 0.886957 | 1.45460948 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 107 | 1.26e-25 | NR | HNV77469.1 | 2026741 | g15863 | i0 | 83.3 | 7.90243902439024 | 54 | 9 | 98.8 | 0 | 162 | 1 | 64 | 117 | HNV77469.1 prolyl oligopeptidase family serine peptidase [Gemmatimonadaceae bacterium] | diamond | 1296 | 107 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 32632822 | 32632822 | PRJNA1188114_P_NODE_15640_length_164_cov_0.886957_g15588_i0 | PRJNA1188114 | 15640 | 164 | 0.886957 | 1.45460948 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 109 | 3.29e-26 | NR | HYW11784.1 | 2029185 | g15588 | i0 | 94.4 | 0.98780487804878 | 54 | 3 | 98.8 | 0 | 2 | 163 | 868 | 921 | HYW11784.1 alpha-2-macroglobulin family protein [Longimicrobium sp.] | diamond | 162 | 109 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;