RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1188114", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Blackburniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Blackburniibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA1188114 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32348872 32348872 PRJNA1188114_P_NODE_11719_length_168_cov_1.714286_g11667_i0 PRJNA1188114 11719 168 1.714286 2.88000048 Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_ 2053523 Bacteria Bacteria 71.6 1.18e-13   NR OGY09246.1 1797513 g11667 i0 66 1.89285714285714 53 18 94.6 0 9 167 1 53 OGY09246.1 MAG: methyltransferase [Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_43_15b] diamond 318 71.6 1 Bacteria Bacteria candidate phyla   Candidatus Blackburniibacteriota         Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_43_15b

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;