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contig_metadata

8 rows where bioproject = "PRJNA1188114" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 8 ✖

bioproject 1

  • PRJNA1188114 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1042049 1042049 PRJNA1188114_P_NODE_12581_length_167_cov_0.864407_g12529_i0 PRJNA1188114 12581 167 0.864407 1.44355969 Bacillati 1783272 Bacteria Bacteria 102 1.37e-17   NTclustered gi|563353835|gb|CP006915.1| 1394711 g12529 i0 94.03 13.7065868263473 67 4 40 0 65 131 98902 98836 Candidatus Saccharibacteria bacterium RAAC3_TM7_1, complete genome blastn 2289 102 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RAAC3_TM7_1
7973206 7973206 PRJNA1188114_P_NODE_10267_length_174_cov_1.488000_g10215_i0 PRJNA1188114 10267 174 1.488 2.58912 Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1 1986206 Bacteria Bacteria 82.8 2.01e-17   NR WP_129693267.1 1986206 g10215 i0 97.6 0.724137931034483 42 1 72.4 0 48 173 1 42 WP_129693267.1 ParA family protein [Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1] diamond 126 82.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Nanosynsacchari Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1
28228143 28228143 PRJNA1188114_P_NODE_14766_length_165_cov_0.879310_g14714_i0 PRJNA1188114 14766 165 0.87931 1.4508615 Candidatus Saccharimonas 1331051 Bacteria Bacteria 107 5.32e-28   NR RKW00848.1 1917697 g14714 i0 100 2 55 0 100 0 1 165 84 138 RKW00848.1 MAG: YdcF family protein, partial [Candidatus Saccharimonas sp.] diamond 330 107 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
29018059 29018059 PRJNA1188114_P_NODE_18588_length_162_cov_0.902655_g18536_i0 PRJNA1188114 18588 162 0.902655 1.4623011 Bacteria 2 Bacteria Bacteria 74.7 3.34e-14   NR OYW42549.1 1970477 g18536 i0 68 5.55555555555556 50 16 92.6 0 2 151 85 134 OYW42549.1 MAG: iron ABC transporter ATP-binding protein, partial [Candidatus Saccharibacteria bacterium 32-45-3] diamond 900 75.1 0.994673768308922 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-45-3
29377581 29377581 PRJNA1188114_P_NODE_19789_length_161_cov_0.910714_g19737_i0 PRJNA1188114 19789 161 0.910714 1.46624954 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 83.6 4.95e-17   NR HSX41164.1 2973664 g19737 i0 79.2 0.987577639751553 53 11 98.8 0 1 159 158 210 HSX41164.1 PBP1A family penicillin-binding protein [Candidatus Saccharimonadales bacterium] diamond 159 83.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
30217691 30217691 PRJNA1188114_P_NODE_19912_length_161_cov_0.910714_g19860_i0 PRJNA1188114 19912 161 0.910714 1.46624954 Pseudomonadati 3379134 Bacteria Bacteria 92 3.78e-22   NR HBO64465.1 2026720 g19860 i0 86.8 5.92546583850932 53 7 98.8 0 160 2 68 120 HBO64465.1 ribosome recycling factor [Candidatus Saccharibacteria bacterium] diamond 954 92 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32348872 32348872 PRJNA1188114_P_NODE_11719_length_168_cov_1.714286_g11667_i0 PRJNA1188114 11719 168 1.714286 2.88000048 Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_ 2053523 Bacteria Bacteria 71.6 1.18e-13   NR OGY09246.1 1797513 g11667 i0 66 1.89285714285714 53 18 94.6 0 9 167 1 53 OGY09246.1 MAG: methyltransferase [Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_43_15b] diamond 318 71.6 1 Bacteria Bacteria candidate phyla   Candidatus Blackburniibacteriota         Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_43_15b
32462716 32462716 PRJNA1188114_P_NODE_13559_length_166_cov_0.871795_g13507_i0 PRJNA1188114 13559 166 0.871795 1.4471797 Candidatus Microsaccharimonas 2959523 Bacteria Bacteria 81.3 6.2e-17   NR OGL23382.1 1802133 g13507 i0 61.8 1.98795180722892 55 21 99.4 0 2 166 76 130 OGL23382.1 MAG: hypothetical protein A2791_00845 [Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_46_30] diamond 330 82 0.991463414634146 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_46_30

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;