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contig_metadata

21 rows where bioproject = "PRJNA1186363" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 21 ✖

bioproject 1

  • PRJNA1186363 · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1594427 1594427 PRJNA1186363_P_NODE_2_length_8323_cov_9.857939_g1_i0 PRJNA1186363 2 8323 9.857939 820.47626297 Zebrafish picornavirus 1 2304617 Viruses Viruses 13725 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g1 i0 96.531 3.04613721014057 8302 277 99 10 7 8303 8298 3 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 25353 13725 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
5422948 5422948 PRJNA1186363_P_NODE_43325_length_243_cov_0.917647_g42437_i0 PRJNA1186363 43325 243 0.917647 2.22988221 Potexvirus trifolii 3433859 Viruses Viruses 405 1.46e-108   NTclustered gi|345645032|dbj|AB669182.1| 12188 g42437 i0 96.708 13.6172839506173 243 8 100 0 1 243 2511 2753 White clover mosaic virus genomic RNA, complete genome, strain: WClMV-RC blastn 3309 405 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
6697593 6697593 PRJNA1186363_P_NODE_21886_length_399_cov_0.923313_g20998_i0 PRJNA1186363 21886 399 0.923313 3.68401887 Geminiviridae sp. 2202566 Viruses Viruses 56.5 0.003   NTclustered gi|2302019654|gb|MT206033.1| 2202566 g20998 i0 96.97 0.468671679197995 33 1 8 0 222 254 1983 2015 MAG: Geminiviridae sp. isolate CN11_L17_1229, complete genome blastn 187 56.5 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Geminiviridae   Geminiviridae sp.
7973038 7973038 PRJNA1186363_P_NODE_35827_length_270_cov_2.319797_g34939_i0 PRJNA1186363 35827 270 2.319797 6.2634519 Mitovirus sp. 2587224 Viruses Viruses 226 1.38e-54   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g34939 i0 87.817 0.72962962962963 197 19 73 3 1 197 5 196 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 197 226 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
8695009 8695009 PRJNA1186363_P_NODE_40827_length_248_cov_0.891429_g39939_i0 PRJNA1186363 40827 248 0.891429 2.21074392 Ilzatvirus 2560150 Viruses Viruses 52.8 0.022   NTclustered gi|1631945517|ref|NC_042111.1| 2079584 g39939 i0 100 2.37096774193548 28 0 11 0 144 171 24213 24240 Microbacterium phage Ilzat, complete genome blastn 588 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Ilzatvirus Ilzatvirus ilzat
9970072 9970072 PRJNA1186363_P_NODE_12348_length_578_cov_1.544554_g11466_i0 PRJNA1186363 12348 578 1.544554 8.92752212 Moumouvirus 3080801 Viruses Viruses 56.5 0.004   NTclustered gi|441431943|ref|NC_020104.1| 1269028 g11466 i0 100 0.103806228373702 30 0 5 0 246 275 220267 220238 Acanthamoeba polyphaga moumouvirus, complete genome blastn 60 56.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Moumouvirus Moumouvirus moumou
11798294 11798294 PRJNA1186363_P_NODE_16170_length_487_cov_1.693237_g15283_i0 PRJNA1186363 16170 487 1.693237 8.24606419 Caudoviricetes sp. 2832643 Viruses Viruses 60.2 2.84e-4   NTclustered gi|2054751057|tpg|BK043420.1| 2832643 g15283 i0 100 0.158110882956879 32 0 10 0 382 413 2643 2674 MAG TPA_asm: Caudoviricetes sp. isolate ctwZF9, partial genome blastn 77 60.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
11798398 11798398 PRJNA1186363_P_NODE_32870_length_293_cov_1.250000_g31982_i0 PRJNA1186363 32870 293 1.25 3.6625 Mitovirus sp. 2587224 Viruses Viruses 274 5.33e-69   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g31982 i0 91.878 0.672354948805461 197 14 67 2 97 293 196 2 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 197 274 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
13795361 13795361 PRJNA1186363_P_NODE_21671_length_401_cov_1.820122_g20783_i0 PRJNA1186363 21671 401 1.820122 7.29868922 Alexandravirus 2733088 Viruses Viruses 52.8 0.038   NTclustered gi|2209260177|ref|NC_061443.1| 2869547 g20783 i0 100 0.139650872817955 28 0 7 0 286 313 106892 106919 Erwinia phage pEa_SNUABM_2, complete genome blastn 56 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Alexandravirus Alexandravirus SNUABM2
14348859 14348859 PRJNA1186363_P_NODE_41432_length_247_cov_0.896552_g40544_i0 PRJNA1186363 41432 247 0.896552 2.21448344 Potexvirus trifolii 3433859 Viruses Viruses 396 8.95e-106   NTclustered gi|2520252303|gb|OQ993368.1| 12188 g40544 i0 95.547 8.99595141700405 247 11 100 0 1 247 684 930 White clover mosaic virus isolate DSMZ PV-1074, complete genome blastn 2222 396 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
14348921 14348921 PRJNA1186363_P_NODE_8832_length_706_cov_2.788310_g7980_i0 PRJNA1186363 8832 706 2.78831 19.6854686 Torque teno midi virus 432261 Viruses Viruses 56.5 0.005   NTclustered gi|2168962934|gb|MN778544.1| 432261 g7980 i0 97.059 0.0481586402266289 34 0 5 1 511 543 2175 2142 MAG: Torque teno midi virus isolate SAfiA-51-52 ORF1 gene, complete cds blastn 34 56.5 1 Viruses   Shotokuvirae Commensaviricota Cardeaviricetes Sanitavirales Anelloviridae   Torque teno midi virus
20721091 20721091 PRJNA1186363_P_NODE_25577_length_357_cov_2.510563_g24689_i0 PRJNA1186363 25577 357 2.510563 8.96270991 Caudoviricetes sp. 2832643 Viruses Viruses 54.7 0.009   NTclustered gi|2059591960|tpg|BK036906.1| 2832643 g24689 i0 100 0.0812324929971989 29 0 8 0 45 73 19262 19234 MAG TPA_asm: Caudoviricetes sp. isolate ctdMI12, partial genome blastn 29 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
24545795 24545795 PRJNA1186363_P_NODE_36980_length_262_cov_1.280423_g36092_i0 PRJNA1186363 36980 262 1.280423 3.35470826 Zebrafish picornavirus 1 2304617 Viruses Viruses 473 4.31e-129   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g36092 i0 99.237 3 262 2 100 0 1 262 4485 4746 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 786 473 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
27767508 27767508 PRJNA1186363_P_NODE_4_length_5539_cov_6.688621_g3_i0 PRJNA1186363 4 5539 6.688621 370.48271719 Macrobrachium rosenbergii picorna-like virus 4 3132542 Viruses Viruses 2370 0   NR WWZ85593.1 3132542 g3 i0 64.5 0.997653005957754 1842 551 94.9 19 2 5260 1154 2981 WWZ85593.1 RNA-dependent RNA polymerase [Macrobrachium rosenbergii picorna-like virus 4] diamond 5526 2370 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Macrobrachium rosenbergii picorna-like virus 4
27893446 27893446 PRJNA1186363_P_NODE_305_length_2352_cov_2.802984_g235_i0 PRJNA1186363 305 2352 2.802984 65.92618368 Macrobrachium rosenbergii picorna-like virus 4 3132542 Viruses Viruses 884 7.320000000000001e-289   NR WWZ85593.1 3132542 g235 i0 56.6 1.02040816326531 800 322 99.9 6 2 2350 330 1121 WWZ85593.1 RNA-dependent RNA polymerase [Macrobrachium rosenbergii picorna-like virus 4] diamond 2400 884 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Macrobrachium rosenbergii picorna-like virus 4
28240676 28240676 PRJNA1186363_P_NODE_30586_length_312_cov_0.828452_g29698_i0 PRJNA1186363 30586 312 0.828452 2.58477024 Tupanvirus soda lake 2126985 Viruses Viruses 91.7 5.4e-19   NR YP_010782554.1 2126985 g29698 i0 55.3 1.46153846153846 76 32 73.1 1 303 76 100 173 YP_010782554.1 ubiquitin-conjugating enzyme [Tupanvirus soda lake] diamond 456 91.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus salinum
29819360 29819360 PRJNA1186363_P_NODE_26291_length_350_cov_1.971119_g25403_i0 PRJNA1186363 26291 350 1.971119 6.8989165 Moumouvirus lavasanguinem 3138182 Viruses Viruses 43.1 0.0123   NR BFL60918.1 3138182 g25403 i0 43.1 0.437142857142857 51 29 43.7 0 265 113 5 55 BFL60918.1 hypothetical protein MoumouF8_00015 [Moumouvirus lavasanguinem] diamond 153 43.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Moumouvirus Moumouvirus sp. 'lavasanguinem'
30672503 30672503 PRJNA1186363_P_NODE_42413_length_245_cov_0.906977_g41525_i0 PRJNA1186363 42413 245 0.906977 2.22209365 Fadolivirus algeromassiliense 3060017 Viruses Viruses 43.5 0.0197   NR YP_010803851.1 3060017 g41525 i0 42 0.612244897959184 50 28 60 1 213 67 22 71 YP_010803851.1 R3H domain-containing protein [Fadolivirus algeromassiliense] diamond 150 43.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
31273010 31273010 PRJNA1186363_P_NODE_2335_length_1302_cov_3.008137_g1938_i0 PRJNA1186363 2335 1302 3.008137 39.16594374 Pandoravirus massiliensis 2060085 Viruses Viruses 183 6.01e-48   NR UDO47403.1 2060085 g1938 i0 31.4 2.06221198156682 452 244 91 12 17 1201 59 501 UDO47403.1 hypothetical protein [Pandoravirus massiliensis] diamond 2685 183 1 Viruses             Pandoravirus Pandoravirus massiliensis
31778985 31778985 PRJNA1186363_P_NODE_37397_length_259_cov_1.258065_g36509_i0 PRJNA1186363 37397 259 1.258065 3.25838835 Clandestinovirus 2831644 Viruses Viruses 98.2 4.39e-23   NR QYA18369.1 2831644 g36509 i0 57.1 0.810810810810811 70 30 81.1 0 48 257 137 206 QYA18369.1 bifunctional linker histone H1/H5 [Clandestinovirus] diamond 210 98.2 1 Viruses               Clandestinovirus
32127329 32127329 PRJNA1186363_P_NODE_6418_length_839_cov_1.593995_g5664_i0 PRJNA1186363 6418 839 1.593995 13.37361805 Macrobrachium rosenbergii picorna-like virus 4 3132542 Viruses Viruses 242 1.12e-68   NR WWZ85593.1 3132542 g5664 i0 47.1 1.00119189511323 280 125 99.4 4 3 836 72 330 WWZ85593.1 RNA-dependent RNA polymerase [Macrobrachium rosenbergii picorna-like virus 4] diamond 840 242 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Macrobrachium rosenbergii picorna-like virus 4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;