RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1186363" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1186363 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1594338 1594338 PRJNA1186363_P_NODE_17562_length_461_cov_3.121134_g16675_i0 PRJNA1186363 17562 461 3.121134 14.38842774 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 226 2.92e-73   NR XP_002768542.1 423536 g16675 i0 77.1 38.1670281995662 144 33 93.7 0 461 30 2 145 XP_002768542.1 ribosomal protein S23, putative [Perkinsus marinus ATCC 50983] diamond 17595 226 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
28954808 28954808 PRJNA1186363_P_NODE_38768_length_252_cov_1.089385_g37880_i0 PRJNA1186363 38768 252 1.089385 2.7452502 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 83.2 2.42e-16   NR KAF4666036.1 330153 g37880 i0 52 8.03571428571429 75 36 89.3 0 239 15 1062 1136 KAF4666036.1 hypothetical protein FOL47_004306, partial [Perkinsus chesapeaki] diamond 2025 83.2 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;