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contig_metadata

16 rows where bioproject = "PRJNA1186363", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 16 ✖

tax_phylum 1

  • Myxococcota · 16 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1186363 · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10523412 10523412 PRJNA1186363_P_NODE_23569_length_379_cov_1.261438_g22681_i0 PRJNA1186363 23569 379 1.261438 4.78085002 Polyangium sp. 3409587 Bacteria Bacteria 226 1.2999999999999999e-73   NR HMY20693.1 57 g22681 i0 86.4 4.94722955145119 125 17 98.9 0 4 378 1 125 HMY20693.1 peptidylprolyl isomerase [Polyangium sp.] diamond 1875 226 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium sp.
11245292 11245292 PRJNA1186363_P_NODE_4009_length_1045_cov_1.597737_g3437_i0 PRJNA1186363 4009 1045 1.597737 16.69635165 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 404 1.4699999999999996e-137   NR MBS1256101.1 2026735 g3437 i0 57.1 2.83349282296651 329 140 94.4 1 54 1040 1 328 MBS1256101.1 Adenine deaminase [Deltaproteobacteria bacterium] diamond 2961 404 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
21996372 21996372 PRJNA1186363_P_NODE_17258_length_467_cov_0.868020_g16371_i0 PRJNA1186363 17258 467 0.86802 4.0536534 Cystobacter fuscus 43 Bacteria Bacteria 647 0   NTclustered gi|1243034522|gb|CP022098.1| 43 g16371 i0 92.308 278.235546038544 455 35 97 0 13 467 389384 388930 Cystobacter fuscus strain DSM 52655 chromosome, complete genome blastn 129936 647 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Cystobacter Cystobacter fuscus
27008873 27008873 PRJNA1186363_P_NODE_22462_length_392_cov_0.902821_g21574_i0 PRJNA1186363 22462 392 0.902821 3.53905832 Pendulispora rubella 2741070 Bacteria Bacteria 49.3 9.81e-4   NR WP_394838112.1 2741070 g21574 i0 43.6 0.420918367346939 55 31 42.1 0 214 50 769 823 WP_394838112.1 protein kinase domain-containing protein [Pendulispora rubella] diamond 165 49.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora rubella
27040741 27040741 PRJNA1186363_P_NODE_40122_length_250_cov_0.881356_g39234_i0 PRJNA1186363 40122 250 0.881356 2.20339 Kofleriaceae bacterium 2212474 Bacteria Bacteria 50.1 1.06e-4   NR HEY1553870.1 2212474 g39234 i0 69.2 1.824 39 11 46.8 1 234 118 395 432 HEY1553870.1 S53 family peptidase [Kofleriaceae bacterium] diamond 456 50.1 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
27312866 27312866 PRJNA1186363_P_NODE_28323_length_331_cov_1.511628_g27435_i0 PRJNA1186363 28323 331 1.511628 5.00348868 root 1 Root_unresolved Root_unresolved 45.4 0.0102   NR WP_095989961.1 43 g27435 i0 34 3.87009063444109 106 62 93.4 4 14 322 94 194 WP_095989961.1 hypothetical protein [Cystobacter fuscus] diamond 1281 45.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Cystobacter Cystobacter fuscus
28556749 28556749 PRJNA1186363_P_NODE_18527_length_446_cov_1.045576_g17639_i0 PRJNA1186363 18527 446 1.045576 4.66326896 Archangium gephyra 48 Bacteria Bacteria 62.4 4.84e-8   NR WP_053066116.1 48 g17639 i0 63.3 0.659192825112108 49 18 33 0 15 161 827 875 WP_053066116.1 kelch repeat-containing protein [Archangium gephyra] diamond 294 62.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium gephyra
30451726 30451726 PRJNA1186363_P_NODE_8153_length_737_cov_1.879518_g7322_i0 PRJNA1186363 8153 737 1.879518 13.85204766 Kofleriaceae bacterium 2212474 Bacteria Bacteria 291 1.8899999999999997e-93   NR MBP9205654.1 2212474 g7322 i0 61.3 2.9674355495251 243 87 98.5 3 736 11 99 335 MBP9205654.1 hypothetical protein [Kofleriaceae bacterium] diamond 2187 291 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
30798836 30798836 PRJNA1186363_P_NODE_16814_length_475_cov_0.970149_g15927_i0 PRJNA1186363 16814 475 0.970149 4.60820775 Myxococcales bacterium 2026763 Bacteria Bacteria 87 1.61e-16   NR MBL8685173.1 2026763 g15927 i0 52.8 1.55368421052632 89 36 52.4 1 225 473 754 842 MBL8685173.1 hypothetical protein [Myxococcales bacterium] diamond 738 87 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31273040 31273040 PRJNA1186363_P_NODE_3475_length_1110_cov_5.571842_g2963_i0 PRJNA1186363 3475 1110 5.571842 61.8474462 Myxococcales bacterium 2026763 Bacteria Bacteria 72.8 1.02e-9   NR NMB77427.1 2026763 g2963 i0 31.2 1.71621621621622 218 90 49.2 10 70 615 337 530 NMB77427.1 hypothetical protein [Myxococcales bacterium] diamond 1905 72.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31652360 31652360 PRJNA1186363_P_NODE_29157_length_324_cov_0.932271_g28269_i0 PRJNA1186363 29157 324 0.932271 3.02055804 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 49.3 2.78e-4   NR MEQ8279463.1 2026735 g28269 i0 33.3 1.5 81 49 74.1 2 319 80 56 132 MEQ8279463.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 486 49.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31715801 31715801 PRJNA1186363_P_NODE_29637_length_320_cov_0.821862_g28749_i0 PRJNA1186363 29637 320 0.821862 2.6299584 Myxococcales bacterium 2026763 Bacteria Bacteria 133 4.889999999999998e-35   NR TFH26984.1 2026763 g28749 i0 63.3 1.875 109 35 97.5 3 2 313 45 153 TFH26984.1 MAG: aldehyde reductase [Myxococcales bacterium] diamond 600 133 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32222057 32222057 PRJNA1186363_P_NODE_36058_length_269_cov_1.193878_g35170_i0 PRJNA1186363 36058 269 1.193878 3.21153182 Myxococcaceae bacterium 2484252 Bacteria Bacteria 48.5 4.31e-4   NR MBL8957818.1 2484252 g35170 i0 66.7 0.33457249070632 30 10 33.5 0 1 90 280 309 MBL8957818.1 isopenicillin N synthase family oxygenase [Myxococcaceae bacterium] diamond 90 48.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
32285656 32285656 PRJNA1186363_P_NODE_39399_length_251_cov_0.876404_g38511_i0 PRJNA1186363 39399 251 0.876404 2.19977404 Polyangiales bacterium 3034171 Bacteria Bacteria 72.4 1.38e-12   NR MEZ4405128.1 3034171 g38511 i0 42.7 1.9601593625498 82 46 96.8 1 245 3 242 323 MEZ4405128.1 MopE-related protein [Polyangiales bacterium] diamond 492 72.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
32651765 32651765 PRJNA1186363_P_NODE_42900_length_244_cov_0.912281_g42012_i0 PRJNA1186363 42900 244 0.912281 2.22596564 Bacteria 2 Bacteria Bacteria 43.1 0.0279   NR MEZ4267003.1 2818507 g42012 i0 51.6 0.811475409836066 31 15 38.1 0 152 244 42 72 MEZ4267003.1 serine/threonine-protein kinase [Myxococcota bacterium] diamond 198 43.1 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32903815 32903815 PRJNA1186363_P_NODE_43660_length_242_cov_0.923077_g42772_i0 PRJNA1186363 43660 242 0.923077 2.23384634 Bacteria 2 Bacteria Bacteria 86.7 1.29e-17   NR MBK6533801.1 2026735 g42772 i0 55 3.96694214876033 80 35 99.2 1 1 240 393 471 MBK6533801.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 960 86.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;