RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1186363" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1186363 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27736028 27736028 PRJNA1186363_P_NODE_31964_length_300_cov_1.193833_g31076_i0 PRJNA1186363 31964 300 1.193833 3.581499 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 137 5e-35   NR MEO8231358.1 2026749 g31076 i0 66.7 6.93 99 33 99 0 2 298 549 647 MEO8231358.1 glycoside hydrolase family 3 N-terminal domain-containing protein [Ignavibacteriota bacterium] diamond 2079 137 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
29030500 29030500 PRJNA1186363_P_NODE_9888_length_660_cov_1.546848_g9012_i0 PRJNA1186363 9888 660 1.546848 10.2091968 Ignavibacteria bacterium 2053306 Bacteria Bacteria 107 4.29e-24   NR MCC7159891.1 2053306 g9012 i0 35.6 0.804545454545455 177 98 77.3 7 514 5 63 230 MCC7159891.1 hypothetical protein [Ignavibacteria bacterium] diamond 531 107 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
29598283 29598283 PRJNA1186363_P_NODE_9130_length_692_cov_1.620355_g8273_i0 PRJNA1186363 9130 692 1.620355 11.2128566 Ignavibacteria bacterium 2053306 Bacteria Bacteria 184 1.44e-53   NR MBN8569740.1 2053306 g8273 i0 96.8 0.411849710982659 95 3 41.2 0 1 285 204 298 MBN8569740.1 hypothetical protein [Ignavibacteria bacterium] diamond 285 184 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;