RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1186363", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1186363 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5422774 5422774 PRJNA1186363_P_NODE_17885_length_456_cov_1.741514_g16997_i0 PRJNA1186363 17885 456 1.741514 7.94130384 Fungi 4751 Fungi Fungi 244 1.03e-79   NR KAG5461027.1 278681 g16997 i0 74.3 25.0197368421053 152 39 100 0 456 1 3 154 KAG5461027.1 MAG: putative ribosomal protein L10 [Olpidium bornovanus] diamond 11409 244 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
28840652 28840652 PRJNA1186363_P_NODE_19648_length_428_cov_1.938028_g18760_i0 PRJNA1186363 19648 428 1.938028 8.29475984 Olpidium bornovanus 278681 Fungi Fungi 144 1.55e-41   NR KAG5460665.1 278681 g18760 i0 60.6 3.98130841121495 109 43 76.4 0 335 9 6 114 KAG5460665.1 MAG: 40S ribosomal protein S19-A, partial [Olpidium bornovanus] diamond 1704 144 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;