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contig_metadata

29 rows where bioproject = "PRJNA1186363" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 29 ✖

bioproject 1

  • PRJNA1186363 · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4146748 4146748 PRJNA1186363_P_NODE_5664_length_896_cov_1.547995_g4967_i0 PRJNA1186363 5664 896 1.547995 13.8700352 Chlamydomonas reinhardtii 3055 Plants Plants 62.1 1.5e-4   NTclustered gi|2082258223|ref|XM_043067336.1| 3055 g4967 i0 86.207 3.359375 58 6 6 2 219 275 1682 1738 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_11g467583v5), mRNA blastn 3010 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
9247709 9247709 PRJNA1186363_P_NODE_36868_length_263_cov_1.231579_g35980_i0 PRJNA1186363 36868 263 1.231579 3.23905277 Chlorella variabilis 554065 Plants Plants 52.8 0.024   NTclustered gi|552828251|ref|XM_005847376.1| 554065 g35980 i0 100 0.106463878326996 28 0 11 0 1 28 2301 2328 Chlorella variabilis hypothetical protein (CHLNCDRAFT_134341) mRNA, complete cds blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
11245267 11245267 PRJNA1186363_P_NODE_23349_length_381_cov_1.519481_g22461_i0 PRJNA1186363 23349 381 1.519481 5.78922261 Raphidocelis subcapitata 307507 Plants Plants 186 1.08e-57   NR GBF93448.1 307507 g22461 i0 81.7 29.8031496062992 120 19 93.7 2 358 2 40 157 GBF93448.1 ribosomal protein S1 [Raphidocelis subcapitata] diamond 11355 186 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
11798428 11798428 PRJNA1186363_P_NODE_36810_length_263_cov_1.563158_g35922_i0 PRJNA1186363 36810 263 1.563158 4.11110554 Trebouxia sp. C 2796353 Plants Plants 77.4 1.61e-16   NR KAL0040442.1 2905653 g35922 i0 85 2.28136882129278 40 6 45.6 0 263 144 37 76 KAL0040442.1 hypothetical protein WJX77_007189 [Trebouxia sp. C0004] diamond 600 77.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0004
14348792 14348792 PRJNA1186363_P_NODE_30752_length_310_cov_1.316456_g29864_i0 PRJNA1186363 30752 310 1.316456 4.0810136 Sanguina aurantia 2578422 Plants Plants 157 2.6199999999999996e-47   NR MEW5301511.1 2578422 g29864 i0 74.3 2.93225806451613 101 26 97.7 0 6 308 8 108 MEW5301511.1 hypothetical protein [Sanguina aurantia] diamond 909 157 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Sanguina Sanguina aurantia
18893459 18893459 PRJNA1186363_P_NODE_22255_length_394_cov_1.308411_g21367_i0 PRJNA1186363 22255 394 1.308411 5.15513934 Eukaryota 2759 Plants Plants 54.7 0.01   NTclustered gi|2082248479|ref|XM_043063354.1| 3055 g21367 i0 100 2.7258883248731 29 0 7 0 195 223 2679 2707 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g286650v5), mRNA blastn 1074 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
24545718 24545718 PRJNA1186363_P_NODE_23980_length_375_cov_1.029801_g23092_i0 PRJNA1186363 23980 375 1.029801 3.86175375 Boodleopsis sp. H.0758 2320802 Plants Plants 60.2 2.13e-4   NTclustered gi|1509834938|ref|NC_039521.1| 2320802 g23092 i0 90.909 0.658666666666667 44 4 12 0 153 196 61819 61862 Boodleopsis sp. H.0758 chloroplast, complete genome blastn 247 60.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Halimedaceae Boodleopsis Boodleopsis sp. H.0758
24545727 24545727 PRJNA1186363_P_NODE_25780_length_355_cov_1.680851_g24892_i0 PRJNA1186363 25780 355 1.680851 5.96702105 Volvox carteri 3067 Plants Plants 56.5 0.003   NTclustered gi|302831723|ref|XM_002947381.1| 3068 g24892 i0 100 1.2 30 0 8 0 326 355 2583 2554 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_87818), partial mRNA blastn 426 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
25268203 25268203 PRJNA1186363_P_NODE_22100_length_396_cov_1.077399_g21212_i0 PRJNA1186363 22100 396 1.077399 4.26650004 Eukaryota 2759 Plants Plants 52.8 0.038   NTclustered gi|302833282|ref|XM_002948159.1| 3068 g21212 i0 100 4.18181818181818 28 0 7 0 1 28 1187 1160 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_88603), partial mRNA blastn 1656 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
26723612 26723612 PRJNA1186363_P_NODE_17401_length_464_cov_1.590793_g16514_i0 PRJNA1186363 17401 464 1.590793 7.38127952 Raphidocelis subcapitata 307507 Plants Plants 206 1.53e-65   NR GBF92135.1 307507 g16514 i0 65.1 10.6875 149 52 96.3 0 18 464 1 149 GBF92135.1 40S ribosomal protein S13 [Raphidocelis subcapitata] diamond 4959 206 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
26787643 26787643 PRJNA1186363_P_NODE_5901_length_877_cov_4.406716_g5187_i0 PRJNA1186363 5901 877 4.406716 38.64689932 Volvox carteri f. nagariensis 3068 Plants Plants 102 3.8900000000000003e-22   NR XP_002957368.1 3068 g5187 i0 34.1 0.77309007981756 226 97 77 6 811 137 37 211 XP_002957368.1 uncharacterized protein VOLCADRAFT_107633 [Volvox carteri f. nagariensis] diamond 678 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
26870189 26870189 PRJNA1186363_P_NODE_24441_length_370_cov_0.919192_g23553_i0 PRJNA1186363 24441 370 0.919192 3.4010104 Eukaryota 2759 Plants Plants 182 6.5699999999999985e-56   NR KAK9811451.1 41462 g23553 i0 76.1 34.1513513513514 117 28 94.9 0 367 17 88 204 KAK9811451.1 hypothetical protein WJX72_004104 [[Myrmecia] bisecta] diamond 12636 182 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
26914019 26914019 PRJNA1186363_P_NODE_27182_length_342_cov_1.159851_g26294_i0 PRJNA1186363 27182 342 1.159851 3.96669042 Coccomyxa viridis 1274662 Plants Plants 124 2.04e-30   NR CAL5223152.1 1274662 g26294 i0 56.8 0.973684210526316 111 45 96.5 2 335 6 32 140 CAL5223152.1 g5620 [Coccomyxa viridis] diamond 333 124 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
27166992 27166992 PRJNA1186363_P_NODE_822_length_1828_cov_2.103134_g649_i0 PRJNA1186363 822 1828 2.103134 38.44528952 Chlamydomonas eustigma 1157962 Plants Plants 70.1 1.83e-8   NR GAX85551.1 1157962 g649 i0 22.4 1.71334792122538 344 213 55 10 1058 54 234 532 GAX85551.1 hypothetical protein CEUSTIGMA_g12966.t1 [Chlamydomonas eustigma] diamond 3132 70.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
27198494 27198494 PRJNA1186363_P_NODE_28842_length_327_cov_0.901575_g27954_i0 PRJNA1186363 28842 327 0.901575 2.94815025 [Myrmecia] bisecta 41462 Plants Plants 133 1.7900000000000002e-33   NR KAK9815818.1 41462 g27954 i0 65.4 4.65137614678899 107 35 98.2 2 323 3 296 400 KAK9815818.1 hypothetical protein WJX72_010164 [[Myrmecia] bisecta] diamond 1521 133 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
27376169 27376169 PRJNA1186363_P_NODE_42483_length_245_cov_0.906977_g41595_i0 PRJNA1186363 42483 245 0.906977 2.22209365 Eukaryota 2759 Plants Plants 50.4 6.06e-5   NR XP_002957435.1 3068 g41595 i0 39 18.3183673469388 82 40 90.6 3 4 225 128 207 XP_002957435.1 uncharacterized protein VOLCADRAFT_68198, partial [Volvox carteri f. nagariensis] diamond 4488 50.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
27514695 27514695 PRJNA1186363_P_NODE_31683_length_302_cov_1.764192_g30795_i0 PRJNA1186363 31683 302 1.764192 5.32785984 Haematococcus lacustris 44745 Plants Plants 165 2.49e-49   NR GFH24947.1 44745 g30795 i0 77.6 2.94039735099338 98 22 97.4 0 302 9 72 169 GFH24947.1 ribosomal protein L15, partial [Haematococcus lacustris] diamond 888 165 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
27565107 27565107 PRJNA1186363_P_NODE_23524_length_379_cov_2.039216_g22636_i0 PRJNA1186363 23524 379 2.039216 7.72862864 root 1 Root_unresolved Root_unresolved 87.4 3.8e-17   NR RMZ56658.1 3075 g22636 i0 44.4 4.37730870712401 108 56 82.3 2 378 67 442 549 RMZ56658.1 hypothetical protein APUTEX25_002747 [Auxenochlorella protothecoides] diamond 1659 88.2 0.99092970521542 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
28114430 28114430 PRJNA1186363_P_NODE_27925_length_335_cov_1.175573_g27037_i0 PRJNA1186363 27925 335 1.175573 3.93816955 Chlorella sorokiniana 3076 Plants Plants 72.4 4.31e-12   NR PRW59002.1 3076 g27037 i0 38 1.93432835820896 108 58 94.9 3 18 335 689 789 PRW59002.1 NAD(P)-binding [Chlorella sorokiniana] diamond 648 72.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
28588380 28588380 PRJNA1186363_P_NODE_35947_length_270_cov_1.147208_g35059_i0 PRJNA1186363 35947 270 1.147208 3.0974616 Bryopsis sp. KO-2 3115439 Plants Plants 52 2.81e-5   NR GMH42937.1 3041901 g35059 i0 40 2.1 65 29 61.1 1 259 95 145 209 GMH42937.1 hypothetical protein BSKO_10859 [Bryopsis sp. KO-2023] diamond 567 52 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023
29914554 29914554 PRJNA1186363_P_NODE_41951_length_246_cov_0.901734_g41063_i0 PRJNA1186363 41951 246 0.901734 2.21826564 Pedinophyceae sp. YPF-7 765719 Plants Plants 58.2 1.38e-7   NR CAG9461656.1 765719 g41063 i0 48.5 1.68292682926829 68 33 80.5 1 3 200 331 398 CAG9461656.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 414 58.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
29965069 29965069 PRJNA1186363_P_NODE_30891_length_309_cov_1.114407_g30003_i0 PRJNA1186363 30891 309 1.114407 3.44351763 Eukaryota 2759 Plants Plants 167 4.11e-50   NR KAL4854017.1 3077 g30003 i0 76.2 69.8834951456311 101 24 98.1 0 2 304 83 183 KAL4854017.1 60S ribosomal protein L10 [Chlorella vulgaris] diamond 21594 168 0.994047619047619 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
30451703 30451703 PRJNA1186363_P_NODE_36293_length_267_cov_1.206186_g35405_i0 PRJNA1186363 36293 267 1.206186 3.22051662 Chlamydomonas eustigma 1157962 Plants Plants 45.1 0.00751   NR GAX85550.1 1157962 g35405 i0 40 2.55056179775281 55 33 61.8 0 238 74 269 323 GAX85550.1 hypothetical protein CEUSTIGMA_g12965.t1 [Chlamydomonas eustigma] diamond 681 45.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
30628266 30628266 PRJNA1186363_P_NODE_13053_length_559_cov_1.847737_g12169_i0 PRJNA1186363 13053 559 1.847737 10.32884983 Chlorophyta 3041 Plants Plants 203 4.95e-63   NR CAG9464993.1 765719 g12169 i0 56.9 8.69409660107335 174 74 92.8 1 519 1 8 181 CAG9464993.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 4860 203 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
30735774 30735774 PRJNA1186363_P_NODE_6854_length_811_cov_3.972900_g6070_i0 PRJNA1186363 6854 811 3.9729 32.220219 Volvox carteri f. nagariensis 3068 Plants Plants 100 8.97e-22   NR XP_002957368.1 3068 g6070 i0 33.6 0.836004932182491 226 98 83.2 6 69 743 37 211 XP_002957368.1 uncharacterized protein VOLCADRAFT_107633 [Volvox carteri f. nagariensis] diamond 678 100 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
31399675 31399675 PRJNA1186363_P_NODE_20356_length_419_cov_1.303468_g19468_i0 PRJNA1186363 20356 419 1.303468 5.46153092 Volvox carteri f. nagariensis 3068 Plants Plants 45.1 0.0237   NR XP_002948120.1 3068 g19468 i0 47.5 0.436754176610979 61 32 43.7 0 339 157 130 190 XP_002948120.1 uncharacterized protein VOLCADRAFT_88419 [Volvox carteri f. nagariensis] diamond 183 45.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
31608396 31608396 PRJNA1186363_P_NODE_36296_length_267_cov_1.206186_g35408_i0 PRJNA1186363 36296 267 1.206186 3.22051662 Eukaryota 2759 Plants Plants 81.3 1.47e-15   NR PSC76207.1 554055 g35408 i0 44.2 2.95505617977528 86 48 96.6 0 10 267 432 517 PSC76207.1 dipeptidyl aminopeptidase acylaminoacyl peptidase [Micractinium conductrix] diamond 789 81.6 0.996323529411765 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix
32095417 32095417 PRJNA1186363_P_NODE_28318_length_331_cov_1.527132_g27430_i0 PRJNA1186363 28318 331 1.527132 5.05480692 Chlamydomonas reinhardtii 3055 Plants Plants 50.4 2.79e-5   NR XP_042923666.1 3055 g27430 i0 44.1 1.09667673716012 59 29 53.5 1 331 155 34 88 XP_042923666.1 uncharacterized protein CHLRE_06g272150v5 [Chlamydomonas reinhardtii] diamond 363 50.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
32714970 32714970 PRJNA1186363_P_NODE_29940_length_317_cov_1.266393_g29052_i0 PRJNA1186363 29940 317 1.266393 4.01446581 Coccomyxa 41891 Plants Plants 124 6.259999999999999e-32   NR XP_005645953.1 574566 g29052 i0 64.9 6.3596214511041 97 32 89.9 2 312 28 250 346 XP_005645953.1 adenosine kinase isoform 1T-like protein [Coccomyxa subellipsoidea C-169] diamond 2016 124 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;