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contig_metadata

26 rows where bioproject = "PRJNA1186363" and tax_clade = "PVC group"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 26 ✖

bioproject 1

  • PRJNA1186363 · 26 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
319684 319684 PRJNA1186363_P_NODE_10081_length_653_cov_1.068966_g9204_i0 PRJNA1186363 10081 653 1.068966 6.98034798 Phycisphaerales bacterium 2052180 Bacteria Bacteria 58.4 0.001   NTclustered gi|1958061316|gb|CP064987.1| 2052180 g9204 i0 100 0.973966309341501 31 0 5 0 351 381 1928298 1928268 Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome blastn 636 58.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
319863 319863 PRJNA1186363_P_NODE_3561_length_1099_cov_3.621832_g3038_i0 PRJNA1186363 3561 1099 3.621832 39.80393368 Stieleria neptunia 2527979 Bacteria Bacteria 56.5 0.009   NTclustered gi|1712721777|gb|CP037423.1| 2527979 g3038 i0 100 0.0272975432211101 30 0 3 0 719 748 10851789 10851760 Stieleria neptunia strain Enr13 chromosome blastn 30 56.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Stieleria Stieleria neptunia
7973130 7973130 PRJNA1186363_P_NODE_7547_length_768_cov_2.722302_g6740_i0 PRJNA1186363 7547 768 2.722302 20.90727936 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 234 3.3899999999999997e-69   NR HSX03888.1 2047756 g6740 i0 54 0.83984375 215 93 82.4 4 766 134 141 353 HSX03888.1 hypothetical protein [Rhabdochlamydiaceae bacterium] diamond 645 234 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
9247749 9247749 PRJNA1186363_P_NODE_43928_length_242_cov_0.923077_g43040_i0 PRJNA1186363 43928 242 0.923077 2.23384634 uncultured Planctomycetaceae bacterium 100233 Bacteria Bacteria 54.7 0.006   NTclustered gi|2874253757|emb|OY969698.1| 100233 g43040 i0 100 0.582644628099174 29 0 12 0 202 230 2534415 2534443 MAG: uncultured Planctomycetaceae bacterium isolate MFD00082.bin.2.56 genome assembly, chromosome: 1 blastn 141 54.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   uncultured Planctomycetaceae bacterium
16896867 16896867 PRJNA1186363_P_NODE_26434_length_349_cov_1.130435_g25546_i0 PRJNA1186363 26434 349 1.130435 3.94521815 Bacteria 2 Bacteria Bacteria 106 2.22e-24   NR MBY0230280.1 2052164 g25546 i0 48.3 2.810888252149 116 59 99.7 1 348 1 274 388 MBY0230280.1 serpin family protein [Gemmataceae bacterium] diamond 981 106 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
23271833 23271833 PRJNA1186363_P_NODE_17499_length_462_cov_2.406170_g16612_i0 PRJNA1186363 17499 462 2.40617 11.1165054 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 122 6.17e-29   NR HSX03888.1 2047756 g16612 i0 46 0.818181818181818 126 58 76.6 3 367 14 29 152 HSX03888.1 hypothetical protein [Rhabdochlamydiaceae bacterium] diamond 378 122 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
26882627 26882627 PRJNA1186363_P_NODE_31921_length_300_cov_1.713656_g31033_i0 PRJNA1186363 31921 300 1.713656 5.140968 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 63.9 2.61e-9   NR HMP82275.1 2026799 g31033 i0 62.5 0.97 48 18 48 0 299 156 216 263 HMP82275.1 kelch repeat-containing protein [Verrucomicrobiota bacterium] diamond 291 63.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
26882635 26882635 PRJNA1186363_P_NODE_38141_length_253_cov_1.733333_g37253_i0 PRJNA1186363 38141 253 1.733333 4.38533249 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 63.9 7.26e-10   NR HOD12385.1 2035772 g37253 i0 46.7 0.711462450592885 60 26 64 1 166 5 44 103 HOD12385.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 180 63.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27660198 27660198 PRJNA1186363_P_NODE_18064_length_453_cov_1.350000_g17176_i0 PRJNA1186363 18064 453 1.35 6.1155 Verrucomicrobiota 74201 Bacteria Bacteria 130 5.57e-34   NR MEI7865572.1 2201154 g17176 i0 50 6.17218543046358 126 56 82.8 4 64 438 54 173 MEI7865572.1 polysaccharide deacetylase family protein [Chthoniobacterales bacterium] diamond 2796 130 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
28304041 28304041 PRJNA1186363_P_NODE_44086_length_227_cov_3.551948_g43198_i0 PRJNA1186363 44086 227 3.551948 8.06292196 Lentisphaeria bacterium 2053569 Bacteria Bacteria 61.2 9.1e-9   NR MBR7138026.1 2053569 g43198 i0 64.3 0.555066079295154 42 15 55.5 0 225 100 317 358 MBR7138026.1 toll/interleukin-1 receptor domain-containing protein [Lentisphaeria bacterium] diamond 126 61.2 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
28366987 28366987 PRJNA1186363_P_NODE_14126_length_532_cov_1.592593_g13242_i0 PRJNA1186363 14126 532 1.592593 8.47259476 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 127 9.3e-32   NR MBP7975267.1 2026799 g13242 i0 60.8 1.15601503759399 97 37 54.7 1 1 291 53 148 MBP7975267.1 glycerophosphodiester phosphodiesterase [Verrucomicrobiota bacterium] diamond 615 127 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28366988 28366988 PRJNA1186363_P_NODE_14326_length_527_cov_2.121145_g13442_i0 PRJNA1186363 14326 527 2.121145 11.17843415 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 198 1.0499999999999998e-56   NR HSX03888.1 2047756 g13442 i0 54.9 0.870967741935484 153 69 87.1 0 527 69 467 619 HSX03888.1 hypothetical protein [Rhabdochlamydiaceae bacterium] diamond 459 198 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
29175784 29175784 PRJNA1186363_P_NODE_42229_length_245_cov_0.906977_g41341_i0 PRJNA1186363 42229 245 0.906977 2.22209365 Pseudomonadati 3379134 Bacteria Bacteria 42.7 0.032   NR MCX6977575.1 2026799 g41341 i0 29.2 3.51428571428571 72 50 86.9 1 233 21 124 195 MCX6977575.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 861 43.1 0.990719257540603 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29251045 29251045 PRJNA1186363_P_NODE_22389_length_393_cov_0.878125_g21501_i0 PRJNA1186363 22389 393 0.878125 3.45103125 Phycisphaerales bacterium 2052180 Bacteria Bacteria 65.5 4.04e-10   NR HIB69548.1 2052180 g21501 i0 51.9 0.412213740458015 54 26 41.2 0 1 162 8 61 HIB69548.1 hypothetical protein [Phycisphaerales bacterium] diamond 162 65.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
29503666 29503666 PRJNA1186363_P_NODE_13910_length_537_cov_2.043103_g13026_i0 PRJNA1186363 13910 537 2.043103 10.97146311 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 133 1.47e-32   NR HSX03888.1 2047756 g13026 i0 50.5 0.620111731843575 111 55 62 0 3 335 509 619 HSX03888.1 hypothetical protein [Rhabdochlamydiaceae bacterium] diamond 333 133 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
29648810 29648810 PRJNA1186363_P_NODE_38470_length_253_cov_0.866667_g37582_i0 PRJNA1186363 38470 253 0.866667 2.19266751 Pseudomonadati 3379134 Bacteria Bacteria 43.1 0.0291   NR MBI3877432.1 2026799 g37582 i0 29.9 1.81422924901186 77 52 88.9 2 13 237 74 150 MBI3877432.1 redoxin domain-containing protein [Verrucomicrobiota bacterium] diamond 459 43.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29787864 29787864 PRJNA1186363_P_NODE_43291_length_243_cov_0.917647_g42403_i0 PRJNA1186363 43291 243 0.917647 2.22988221 Opitutales bacterium 2026772 Bacteria Bacteria 44.3 0.0106   NR MFP4069785.1 2026772 g42403 i0 33.3 0.703703703703704 57 31 70.4 1 17 187 481 530 MFP4069785.1 alpha/beta fold hydrolase [Opitutales bacterium] diamond 171 44.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
30122847 30122847 PRJNA1186363_P_NODE_42452_length_245_cov_0.906977_g41564_i0 PRJNA1186363 42452 245 0.906977 2.22209365 Pseudomonadati 3379134 Bacteria Bacteria 52.4 1.52e-5   NR HKB05582.1 2052164 g41564 i0 44.3 3.55102040816327 70 35 83.3 3 209 6 93 160 HKB05582.1 hypothetical protein [Gemmataceae bacterium] diamond 870 52.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
30135169 30135169 PRJNA1186363_P_NODE_41212_length_247_cov_1.321839_g40324_i0 PRJNA1186363 41212 247 1.321839 3.26494233 Chlamydiales bacterium 2047757 Bacteria Bacteria 44.7 0.00856   NR MFI5343916.1 2047757 g40324 i0 45.5 0.668016194331984 55 28 66.8 1 83 247 1677 1729 MFI5343916.1 DUF3638 domain-containing protein [Chlamydiales bacterium] diamond 165 44.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
30154310 30154310 PRJNA1186363_P_NODE_43312_length_243_cov_0.917647_g42424_i0 PRJNA1186363 43312 243 0.917647 2.22988221 Bacteria 2 Bacteria Bacteria 129 2.27e-33   NR KPL25334.1 1703410 g42424 i0 75.3 16 81 20 100 0 1 243 285 365 KPL25334.1 MAG: 6-phosphogluconate dehydrogenase [Phycisphaerae bacterium SM1_79] diamond 3888 130 0.992307692307692 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium SM1_79
30546247 30546247 PRJNA1186363_P_NODE_38613_length_253_cov_0.866667_g37725_i0 PRJNA1186363 38613 253 0.866667 2.19266751 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 55.5 1.38e-6   NR MFP6764498.1 2026779 g37725 i0 44.7 0.901185770750988 76 35 88.9 2 9 233 189 258 MFP6764498.1 Calx-beta domain-containing protein [Planctomycetaceae bacterium] diamond 228 55.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
30830492 30830492 PRJNA1186363_P_NODE_17294_length_466_cov_1.353690_g16407_i0 PRJNA1186363 17294 466 1.35369 6.3081954 Candidatus Scalindua sp. 2268189 Bacteria Bacteria 69.7 8.23e-11   NR MBT3880675.1 2268189 g16407 i0 53.7 0.347639484978541 54 25 34.8 0 2 163 241 294 MBT3880675.1 dihydrodipicolinate synthase family protein [Candidatus Scalindua sp.] diamond 162 69.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Candidatus Brocadiia Candidatus Brocadiales Candidatus Scalinduaceae Candidatus Scalindua Candidatus Scalindua sp.
31052058 31052058 PRJNA1186363_P_NODE_41055_length_248_cov_0.891429_g40167_i0 PRJNA1186363 41055 248 0.891429 2.21074392 Phycisphaeraceae bacterium 2026777 Bacteria Bacteria 150 5.93e-43   NR MCC6581972.1 2026777 g40167 i0 81.7 0.991935483870968 82 15 99.2 0 2 247 149 230 MCC6581972.1 hypothetical protein [Phycisphaeraceae bacterium] diamond 246 150 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales Phycisphaeraceae   Phycisphaeraceae bacterium
31431070 31431070 PRJNA1186363_P_NODE_24516_length_369_cov_1.054054_g23628_i0 PRJNA1186363 24516 369 1.054054 3.88945926 Planctomycetota bacterium 2026780 Bacteria Bacteria 45.1 0.0248   NR MCH8967560.1 2026780 g23628 i0 40.5 1.61788617886179 79 36 56.1 5 4 210 642 719 MCH8967560.1 FG-GAP repeat protein [Planctomycetota bacterium] diamond 597 45.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32348816 32348816 PRJNA1186363_P_NODE_28979_length_325_cov_1.912698_g28091_i0 PRJNA1186363 28979 325 1.912698 6.2162685 Planctomycetota bacterium 2026780 Bacteria Bacteria 55.1 1.03e-6   NR MEY4774332.1 2026780 g28091 i0 34.4 0.886153846153846 96 55 88.6 2 31 318 1 88 MEY4774332.1 hypothetical protein [Planctomycetota bacterium] diamond 288 55.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32727574 32727574 PRJNA1186363_P_NODE_40840_length_248_cov_0.891429_g39952_i0 PRJNA1186363 40840 248 0.891429 2.21074392 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 49.7 5.52e-5   NR MCQ2393371.1 2212473 g39952 i0 87.5 0.290322580645161 24 3 29 0 3 74 135 158 MCQ2393371.1 nucleoside deaminase [Kiritimatiellia bacterium] diamond 72 49.7 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;