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contig_metadata

15 rows where bioproject = "PRJNA1186363", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 15 ✖

tax_clade 1

  • Discoba · 15 ✖

bioproject 1

  • PRJNA1186363 · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6697689 6697689 PRJNA1186363_P_NODE_37806_length_256_cov_1.273224_g36918_i0 PRJNA1186363 37806 256 1.273224 3.25945344 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 54.7 0.006   NTclustered gi|2031942099|emb|OD958049.1| 5763 g36918 i0 100 0.11328125 29 0 11 0 215 243 7749 7777 Naegleria fowleri Karachi_NF001 strain blastn 29 54.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
13795381 13795381 PRJNA1186363_P_NODE_42211_length_245_cov_0.906977_g41323_i0 PRJNA1186363 42211 245 0.906977 2.22209365 Naegleria 5761 Heterolobosea other_Eukaryota 442 1.1199999999999994e-119   NTclustered gi|2618963742|gb|OR769034.1| 5762 g41323 i0 99.184 29.665306122449 245 2 100 0 1 245 4108 3864 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 7268 442 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16896942 16896942 PRJNA1186363_P_NODE_40854_length_248_cov_0.891429_g39966_i0 PRJNA1186363 40854 248 0.891429 2.21074392 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 154 2.36e-41   NR XP_002675895.1 5762 g39966 i0 85.2 6.93145161290323 81 12 98 0 248 6 80 160 XP_002675895.1 alanyl-tRNA synthetase [Naegleria gruberi] diamond 1719 154 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21996423 21996423 PRJNA1186363_P_NODE_23998_length_374_cov_3.963455_g23110_i0 PRJNA1186363 23998 374 3.963455 14.8233217 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 60.2 2.13e-4   NTclustered gi|2119421598|ref|XM_044690396.1| 51637 g23110 i0 100 0.0855614973262032 32 0 9 0 111 142 1041 1072 Naegleria lovaniensis uncharacterized protein (C9374_014411), partial mRNA blastn 32 60.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
23272013 23272013 PRJNA1186363_P_NODE_41259_length_247_cov_0.896552_g40371_i0 PRJNA1186363 41259 247 0.896552 2.21448344 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 187 5.87e-43   NTclustered gi|256665307|gb|AC237578.1| 5762 g40371 i0 81.356 0.955465587044534 236 38 94 6 8 238 36903 36669 Naegleria gruberi clone JGIBGAG-5H16, complete sequence blastn 236 187 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26851025 26851025 PRJNA1186363_P_NODE_39181_length_251_cov_1.859551_g38293_i0 PRJNA1186363 39181 251 1.859551 4.66747301 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 54.3 3.35e-6   NR XP_044545604.1 51637 g38293 i0 42.3 0.932270916334661 78 42 93.2 1 249 16 16 90 XP_044545604.1 uncharacterized protein C9374_008485 [Naegleria lovaniensis] diamond 234 54.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
27546257 27546257 PRJNA1186363_P_NODE_26544_length_348_cov_1.134545_g25656_i0 PRJNA1186363 26544 348 1.134545 3.9482166 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 44.3 0.0254   NR XP_002683048.1 5762 g25656 i0 34.2 0.655172413793103 76 46 62.9 2 82 300 26 100 XP_002683048.1 uncharacterized protein NAEGRDRAFT_44969 [Naegleria gruberi] diamond 228 44.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28039031 28039031 PRJNA1186363_P_NODE_35585_length_272_cov_1.959799_g34697_i0 PRJNA1186363 35585 272 1.959799 5.33065328 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 153 7.88e-43   NR XP_044561356.1 5763 g34697 i0 83 11.7242647058824 88 15 97.1 0 4 267 48 135 XP_044561356.1 uncharacterized protein FDP41_004542 [Naegleria fowleri] diamond 3189 154 0.993506493506494 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28493561 28493561 PRJNA1186363_P_NODE_27527_length_339_cov_0.962406_g26639_i0 PRJNA1186363 27527 339 0.962406 3.26255634 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 46.2 0.00695   NR XP_044567221.1 5763 g26639 i0 35.8 1.69911504424779 81 49 69.9 2 294 58 90 169 XP_044567221.1 uncharacterized protein FDP41_011438 [Naegleria fowleri] diamond 576 46.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
29648809 29648809 PRJNA1186363_P_NODE_37790_length_256_cov_1.278689_g36902_i0 PRJNA1186363 37790 256 1.278689 3.27344384 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 63.2 2.68e-9   NR XP_002682561.1 5762 g36902 i0 58 3.55078125 50 21 58.6 0 250 101 305 354 XP_002682561.1 uncharacterized protein NAEGRDRAFT_60237 [Naegleria gruberi] diamond 909 63.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30230279 30230279 PRJNA1186363_P_NODE_42752_length_244_cov_0.912281_g41864_i0 PRJNA1186363 42752 244 0.912281 2.22596564 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 156 1.0399999999999997e-42   NR XP_002678813.1 5762 g41864 i0 96.3 0.995901639344262 81 3 99.6 0 244 2 402 482 XP_002678813.1 uncharacterized protein NAEGRDRAFT_65854 [Naegleria gruberi] diamond 243 156 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30344712 30344712 PRJNA1186363_P_NODE_15372_length_503_cov_1.632558_g14486_i0 PRJNA1186363 15372 503 1.632558 8.21176674 Naegleria 5761 Heterolobosea other_Eukaryota 97.4 2.71e-20   NR XP_002672949.1 5762 g14486 i0 43.1 1.5506958250497 102 56 59.6 1 420 121 1 102 XP_002672949.1 uncharacterized protein NAEGRDRAFT_51924 [Naegleria gruberi] diamond 780 98.2 0.991853360488798 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30483113 30483113 PRJNA1186363_P_NODE_40993_length_248_cov_0.891429_g40105_i0 PRJNA1186363 40993 248 0.891429 2.21074392 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 122 3.2300000000000004e-33   NR XP_002682474.1 5762 g40105 i0 80 0.967741935483871 80 14 95.6 2 10 246 42 120 XP_002682474.1 uncharacterized protein NAEGRDRAFT_30019 [Naegleria gruberi] diamond 240 122 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30483122 30483122 PRJNA1186363_P_NODE_43773_length_242_cov_0.923077_g42885_i0 PRJNA1186363 43773 242 0.923077 2.23384634 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 134 2.84e-35   NR XP_002680092.1 5762 g42885 i0 80 0.991735537190083 80 16 99.2 0 240 1 374 453 XP_002680092.1 uncharacterized protein NAEGRDRAFT_47246 [Naegleria gruberi] diamond 240 134 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31873907 31873907 PRJNA1186363_P_NODE_28077_length_333_cov_2.011538_g27189_i0 PRJNA1186363 28077 333 2.011538 6.69842154 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 79.3 1.53e-14   NR XP_002673568.1 5762 g27189 i0 40.4 1.69369369369369 94 54 84.7 1 320 39 729 820 XP_002673568.1 alpha-actinin [Naegleria gruberi] diamond 564 79.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;