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contig_metadata

30 rows where bioproject = "PRJNA1186363" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 30 ✖

bioproject 1

  • PRJNA1186363 · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2870608 2870608 PRJNA1186363_P_NODE_40743_length_248_cov_0.891429_g39855_i0 PRJNA1186363 40743 248 0.891429 2.21074392 Euglena gracilis 3039 Euglenozoa other_Eukaryota 119 3.26e-33   NR QLA09593.1 3039 g39855 i0 81.6 0.919354838709677 76 7 83.5 2 243 37 1 76 QLA09593.1 40S small subunit ribosomal protein eS28 [Euglena gracilis] diamond 228 119 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
4146680 4146680 PRJNA1186363_P_NODE_35524_length_273_cov_1.170000_g34636_i0 PRJNA1186363 35524 273 1.17 3.1941 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 124 2.26e-32   NR KAJ9458038.1 91374 g34636 i0 63.3 6.92307692307692 90 33 98.9 0 271 2 158 247 KAJ9458038.1 Elongation factor 1-alpha [Diplonema papillatum] diamond 1890 125 0.992 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
6144836 6144836 PRJNA1186363_P_NODE_38005_length_254_cov_1.662983_g37117_i0 PRJNA1186363 38005 254 1.662983 4.22397682 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 200 7.78e-47   NTclustered gi|45686188|gb|AY568293.1| 5656 g37117 i0 83.41 75.8425196850394 217 34 85 2 7 222 1604 1819 Crithidia fasciculata paraflagellar rod protein (PFR2) mRNA, complete cds blastn 19264 202 0.99009900990099 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
6697689 6697689 PRJNA1186363_P_NODE_37806_length_256_cov_1.273224_g36918_i0 PRJNA1186363 37806 256 1.273224 3.25945344 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 54.7 0.006   NTclustered gi|2031942099|emb|OD958049.1| 5763 g36918 i0 100 0.11328125 29 0 11 0 215 243 7749 7777 Naegleria fowleri Karachi_NF001 strain blastn 29 54.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
7972890 7972890 PRJNA1186363_P_NODE_15467_length_501_cov_1.995327_g14581_i0 PRJNA1186363 15467 501 1.995327 9.99658827 Leishmania sp. Namibia 2802991 Euglenozoa other_Eukaryota 52.8 0.049   NTclustered gi|2794993361|ref|XM_067850475.1| 2802991 g14581 i0 100 0.0558882235528942 28 0 6 0 179 206 1208 1181 Leishmania sp. Namibia uncharacterized protein (JIQ42_02267), partial mRNA blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania sp. Namibia
11798415 11798415 PRJNA1186363_P_NODE_35350_length_274_cov_1.552239_g34462_i0 PRJNA1186363 35350 274 1.552239 4.25313486 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 412 9.999999999999999e-111   NTclustered gi|62871455|gb|AY998642.1| 127150 g34462 i0 94.161 89.4416058394161 274 10 100 5 1 274 1144 1411 Rhynchomonas nasuta strain SCCAP RH3 18S ribosomal RNA gene, partial sequence blastn 24507 412 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
13795381 13795381 PRJNA1186363_P_NODE_42211_length_245_cov_0.906977_g41323_i0 PRJNA1186363 42211 245 0.906977 2.22209365 Naegleria 5761 Heterolobosea other_Eukaryota 442 1.1199999999999994e-119   NTclustered gi|2618963742|gb|OR769034.1| 5762 g41323 i0 99.184 29.665306122449 245 2 100 0 1 245 4108 3864 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 7268 442 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14348783 14348783 PRJNA1186363_P_NODE_29492_length_321_cov_0.943548_g28604_i0 PRJNA1186363 29492 321 0.943548 3.02878908 root 1 Root_unresolved Root_unresolved 130 1.48e-35   NR KAF0852490.1 505711 g28604 i0 61.3 8.93457943925234 93 34 86.9 1 14 292 116 206 KAF0852490.1 mitochondrial iron/manganese superoxide dismutase [Andalucia godoyi] diamond 2868 130 1 Eukaryota Discoba       Jakobida Andaluciidae Andalucia Andalucia godoyi
16896942 16896942 PRJNA1186363_P_NODE_40854_length_248_cov_0.891429_g39966_i0 PRJNA1186363 40854 248 0.891429 2.21074392 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 154 2.36e-41   NR XP_002675895.1 5762 g39966 i0 85.2 6.93145161290323 81 12 98 0 248 6 80 160 XP_002675895.1 alanyl-tRNA synthetase [Naegleria gruberi] diamond 1719 154 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18893456 18893456 PRJNA1186363_P_NODE_21215_length_407_cov_1.913174_g20327_i0 PRJNA1186363 21215 407 1.913174 7.78661818 Reclinomonas 48482 Root_unresolved Root_unresolved 165 4.8100000000000004e-36   NTclustered gi|462269548|gb|KC353356.1| 1295593 g20327 i0 84.302 1.6977886977887 172 23 42 4 5 174 53594 53425 Reclinomonas americana ATCC 50633 mitochondrion, complete genome blastn 691 165 1 Eukaryota Discoba       Jakobida Histionidae Reclinomonas Reclinomonas americana
18893476 18893476 PRJNA1186363_P_NODE_33235_length_290_cov_1.437788_g32347_i0 PRJNA1186363 33235 290 1.437788 4.1695852 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 250 8.87e-62   NTclustered gi|25986836|gb|AY122632.1| 75058 g32347 i0 82.624 95.648275862069 282 49 97 0 9 290 907 1188 Bodo saltans strain Konstanz heat shock protein 90 (HSP-90) gene, partial cds blastn 27738 250 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
21443920 21443920 PRJNA1186363_P_NODE_19797_length_426_cov_1.617564_g18909_i0 PRJNA1186363 19797 426 1.617564 6.89082264 Trypanosoma 5690 Euglenozoa other_Eukaryota 54.7 0.011   NTclustered gi|2785782148|ref|XM_067222528.1| 5694 g18909 i0 100 0.204225352112676 29 0 7 0 388 416 1630 1602 Trypanosoma equiperdum uncharacterized protein (TEOVI_000041500), partial mRNA blastn 87 54.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma equiperdum
21996423 21996423 PRJNA1186363_P_NODE_23998_length_374_cov_3.963455_g23110_i0 PRJNA1186363 23998 374 3.963455 14.8233217 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 60.2 2.13e-4   NTclustered gi|2119421598|ref|XM_044690396.1| 51637 g23110 i0 100 0.0855614973262032 32 0 9 0 111 142 1041 1072 Naegleria lovaniensis uncharacterized protein (C9374_014411), partial mRNA blastn 32 60.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
21996447 21996447 PRJNA1186363_P_NODE_28358_length_331_cov_1.205426_g27470_i0 PRJNA1186363 28358 331 1.205426 3.98996006 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 359 1.64e-94   NTclustered gi|62871455|gb|AY998642.1| 127150 g27470 i0 86.486 97.888217522658607 333 38 100 5 1 331 630 957 Rhynchomonas nasuta strain SCCAP RH3 18S ribosomal RNA gene, partial sequence blastn 32401 359 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
23272013 23272013 PRJNA1186363_P_NODE_41259_length_247_cov_0.896552_g40371_i0 PRJNA1186363 41259 247 0.896552 2.21448344 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 187 5.87e-43   NTclustered gi|256665307|gb|AC237578.1| 5762 g40371 i0 81.356 0.955465587044534 236 38 94 6 8 238 36903 36669 Naegleria gruberi clone JGIBGAG-5H16, complete sequence blastn 236 187 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24545715 24545715 PRJNA1186363_P_NODE_23880_length_376_cov_1.019802_g22992_i0 PRJNA1186363 23880 376 1.019802 3.83445552 Leishmania 5658 Euglenozoa other_Eukaryota 169 1.5799999999999998e-47   NR TPP48826.1 5661 g22992 i0 74 22.5797872340426 123 29 98.1 2 374 6 156 275 TPP48826.1 succinate-CoA ligase, alpha subunit family protein [Leishmania donovani] diamond 8490 169 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania donovani
24545788 24545788 PRJNA1186363_P_NODE_35680_length_272_cov_1.150754_g34792_i0 PRJNA1186363 35680 272 1.150754 3.13005088 Leishmania sp. Namibia 2802991 Euglenozoa other_Eukaryota 52.8 0.025   NTclustered gi|2794993361|ref|XM_067850475.1| 2802991 g34792 i0 100 0.102941176470588 28 0 10 0 228 255 1181 1208 Leishmania sp. Namibia uncharacterized protein (JIQ42_02267), partial mRNA blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania sp. Namibia
26851025 26851025 PRJNA1186363_P_NODE_39181_length_251_cov_1.859551_g38293_i0 PRJNA1186363 39181 251 1.859551 4.66747301 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 54.3 3.35e-6   NR XP_044545604.1 51637 g38293 i0 42.3 0.932270916334661 78 42 93.2 1 249 16 16 90 XP_044545604.1 uncharacterized protein C9374_008485 [Naegleria lovaniensis] diamond 234 54.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
27198514 27198514 PRJNA1186363_P_NODE_39102_length_252_cov_0.871508_g38214_i0 PRJNA1186363 39102 252 0.871508 2.19620016 Euglena gracilis 3039 Euglenozoa other_Eukaryota 135 7.329999999999998e-35   NR AAF71706.1 3039 g38214 i0 70.2 1 84 25 100 0 1 252 539 622 AAF71706.1 elongation factor 2, partial [Euglena gracilis] diamond 252 135 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
27217581 27217581 PRJNA1186363_P_NODE_38042_length_254_cov_1.292818_g37154_i0 PRJNA1186363 38042 254 1.292818 3.28375772 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 123 8.06e-33   NR KAF0852660.1 505711 g37154 i0 71.6 6.74409448818898 81 23 95.7 0 247 5 64 144 KAF0852660.1 60S large subunit ribosomal protein uL30 (rpL7) [Andalucia godoyi] diamond 1713 123 1 Eukaryota Discoba       Jakobida Andaluciidae Andalucia Andalucia godoyi
27546257 27546257 PRJNA1186363_P_NODE_26544_length_348_cov_1.134545_g25656_i0 PRJNA1186363 26544 348 1.134545 3.9482166 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 44.3 0.0254   NR XP_002683048.1 5762 g25656 i0 34.2 0.655172413793103 76 46 62.9 2 82 300 26 100 XP_002683048.1 uncharacterized protein NAEGRDRAFT_44969 [Naegleria gruberi] diamond 228 44.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
27672751 27672751 PRJNA1186363_P_NODE_43084_length_243_cov_1.305882_g42196_i0 PRJNA1186363 43084 243 1.305882 3.17329326 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 73.6 3.42e-13   NR KAJ9458764.1 91374 g42196 i0 42.9 2.07407407407407 84 44 98.8 1 2 241 126 209 KAJ9458764.1 Purple acid phosphatase 7 [Diplonema papillatum] diamond 504 73.6 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
28039031 28039031 PRJNA1186363_P_NODE_35585_length_272_cov_1.959799_g34697_i0 PRJNA1186363 35585 272 1.959799 5.33065328 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 153 7.88e-43   NR XP_044561356.1 5763 g34697 i0 83 11.7242647058824 88 15 97.1 0 4 267 48 135 XP_044561356.1 uncharacterized protein FDP41_004542 [Naegleria fowleri] diamond 3189 154 0.993506493506494 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28493561 28493561 PRJNA1186363_P_NODE_27527_length_339_cov_0.962406_g26639_i0 PRJNA1186363 27527 339 0.962406 3.26255634 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 46.2 0.00695   NR XP_044567221.1 5763 g26639 i0 35.8 1.69911504424779 81 49 69.9 2 294 58 90 169 XP_044567221.1 uncharacterized protein FDP41_011438 [Naegleria fowleri] diamond 576 46.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
29648809 29648809 PRJNA1186363_P_NODE_37790_length_256_cov_1.278689_g36902_i0 PRJNA1186363 37790 256 1.278689 3.27344384 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 63.2 2.68e-9   NR XP_002682561.1 5762 g36902 i0 58 3.55078125 50 21 58.6 0 250 101 305 354 XP_002682561.1 uncharacterized protein NAEGRDRAFT_60237 [Naegleria gruberi] diamond 909 63.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30230279 30230279 PRJNA1186363_P_NODE_42752_length_244_cov_0.912281_g41864_i0 PRJNA1186363 42752 244 0.912281 2.22596564 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 156 1.0399999999999997e-42   NR XP_002678813.1 5762 g41864 i0 96.3 0.995901639344262 81 3 99.6 0 244 2 402 482 XP_002678813.1 uncharacterized protein NAEGRDRAFT_65854 [Naegleria gruberi] diamond 243 156 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30344712 30344712 PRJNA1186363_P_NODE_15372_length_503_cov_1.632558_g14486_i0 PRJNA1186363 15372 503 1.632558 8.21176674 Naegleria 5761 Heterolobosea other_Eukaryota 97.4 2.71e-20   NR XP_002672949.1 5762 g14486 i0 43.1 1.5506958250497 102 56 59.6 1 420 121 1 102 XP_002672949.1 uncharacterized protein NAEGRDRAFT_51924 [Naegleria gruberi] diamond 780 98.2 0.991853360488798 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30483113 30483113 PRJNA1186363_P_NODE_40993_length_248_cov_0.891429_g40105_i0 PRJNA1186363 40993 248 0.891429 2.21074392 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 122 3.2300000000000004e-33   NR XP_002682474.1 5762 g40105 i0 80 0.967741935483871 80 14 95.6 2 10 246 42 120 XP_002682474.1 uncharacterized protein NAEGRDRAFT_30019 [Naegleria gruberi] diamond 240 122 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30483122 30483122 PRJNA1186363_P_NODE_43773_length_242_cov_0.923077_g42885_i0 PRJNA1186363 43773 242 0.923077 2.23384634 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 134 2.84e-35   NR XP_002680092.1 5762 g42885 i0 80 0.991735537190083 80 16 99.2 0 240 1 374 453 XP_002680092.1 uncharacterized protein NAEGRDRAFT_47246 [Naegleria gruberi] diamond 240 134 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31873907 31873907 PRJNA1186363_P_NODE_28077_length_333_cov_2.011538_g27189_i0 PRJNA1186363 28077 333 2.011538 6.69842154 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 79.3 1.53e-14   NR XP_002673568.1 5762 g27189 i0 40.4 1.69369369369369 94 54 84.7 1 320 39 729 820 XP_002673568.1 alpha-actinin [Naegleria gruberi] diamond 564 79.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;