RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1186363", tax_clade = "Bacteria candidate phyla" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1186363 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29427922 29427922 PRJNA1186363_P_NODE_20869_length_412_cov_1.147493_g19981_i0 PRJNA1186363 20869 412 1.147493 4.72767116 Bacillati 1783272 Bacteria Bacteria 47.8 0.00377   NR MCX6825289.1 2044938 g19981 i0 36.5 7.71844660194175 85 45 55.3 4 34 261 386 470 MCX6825289.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [candidate division SR1 bacterium] diamond 3180 48.1 0.993762993762994 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
29440409 29440409 PRJNA1186363_P_NODE_38750_length_252_cov_1.284916_g37862_i0 PRJNA1186363 38750 252 1.284916 3.23798832 Candidatus Moraniibacteriota bacterium 2045217 Bacteria Bacteria 63.9 2.15e-10   NR TXH07701.1 2045217 g37862 i0 39.5 0.904761904761905 76 39 82.1 1 209 3 12 87 TXH07701.1 MAG: hypothetical protein E6Q06_01880 [Candidatus Moraniibacteriota bacterium] diamond 228 63.9 1 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moraniibacteriota bacterium
30293872 30293872 PRJNA1186363_P_NODE_39032_length_252_cov_0.871508_g38144_i0 PRJNA1186363 39032 252 0.871508 2.19620016 Candidatus Jorgensenbacteria bacterium RIFCSPLOWO2_ 2268185 Bacteria Bacteria 56.6 5.12e-7   NR OGG40694.1 1798471 g38144 i0 39.2 2.67857142857143 74 45 88.1 0 30 251 225 298 OGG40694.1 MAG: hypothetical protein A3A21_00415 [Candidatus Jorgensenbacteria bacterium RIFCSPLOWO2_01_FULL_45_25b] diamond 675 56.6 1 Bacteria Bacteria candidate phyla   Candidatus Joergenseniibacteriota         Candidatus Jorgensenbacteria bacterium RIFCSPLOWO2_01_FULL_45_25b

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;