RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1186363" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 6 ✖

bioproject 1

  • PRJNA1186363 · 6 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14348770 14348770 PRJNA1186363_P_NODE_26912_length_344_cov_1.944649_g26024_i0 PRJNA1186363 26912 344 1.944649 6.68959256 Thecamonas trahens 529818 Root_unresolved Root_unresolved 56.5 0.003   NTclustered gi|923127316|ref|XM_013901671.1| 461836 g26024 i0 100 0.351744186046512 30 0 9 0 14 43 504 533 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_11968), mRNA blastn 121 56.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28114455 28114455 PRJNA1186363_P_NODE_37385_length_259_cov_1.258065_g36497_i0 PRJNA1186363 37385 259 1.258065 3.25838835 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 68.2 4.74e-11   NR XP_013752795.1 461836 g36497 i0 45.2 1.56370656370656 84 45 97.3 1 255 4 48 130 XP_013752795.1 cycloartenol-C-24-methyltransferase [Thecamonas trahens ATCC 50062] diamond 405 68.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30325610 30325610 PRJNA1186363_P_NODE_34352_length_282_cov_1.119617_g33464_i0 PRJNA1186363 34352 282 1.119617 3.15731994 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 103 1.5199999999999995e-23   NR XP_013759182.1 461836 g33464 i0 58.1 0.98936170212766 93 35 98.9 2 281 3 335 423 XP_013759182.1 peptidase S8 and S53 domain-containing protein [Thecamonas trahens ATCC 50062] diamond 279 103 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30691626 30691626 PRJNA1186363_P_NODE_29193_length_323_cov_1.560000_g28305_i0 PRJNA1186363 29193 323 1.56 5.0388 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 98.2 4.0899999999999997e-23   NR XP_013755759.1 461836 g28305 i0 45.3 1.96904024767802 106 58 98.5 0 2 319 30 135 XP_013755759.1 uncharacterized protein AMSG_08003 [Thecamonas trahens ATCC 50062] diamond 636 98.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31778960 31778960 PRJNA1186363_P_NODE_25637_length_357_cov_1.098592_g24749_i0 PRJNA1186363 25637 357 1.098592 3.92197344 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 58.9 2.09e-7   NR XP_013759479.1 461836 g24749 i0 51.5 0.554621848739496 66 29 52.9 2 332 144 1 66 XP_013759479.1 uncharacterized protein AMSG_02572 [Thecamonas trahens ATCC 50062] diamond 198 58.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32853318 32853318 PRJNA1186363_P_NODE_16880_length_473_cov_1.680000_g15993_i0 PRJNA1186363 16880 473 1.68 7.9464 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 83.6 6.48e-17   NR XP_013753243.1 461836 g15993 i0 32.9 0.983086680761099 155 98 95.1 4 466 17 8 161 XP_013753243.1 uncharacterized protein AMSG_10809 [Thecamonas trahens ATCC 50062] diamond 465 83.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;