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contig_metadata

25 rows where bioproject = "PRJNA1182301", tax_phylum = "Thermodesulfobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 25 ✖

tax_phylum 1

  • Thermodesulfobacteriota · 25 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1182301 · 25 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2869004 2869004 PRJNA1182301_P_NODE_19703_length_289_cov_1.972222_g19578_i0 PRJNA1182301 19703 289 1.972222 5.69972158 Desulfococcus multivorans 897 Bacteria Bacteria 311 4e-80   NTclustered gi|1092202713|gb|CP015381.1| 897 g19578 i0 86.111 1.99307958477509 288 40 99 0 2 289 2302678 2302391 Desulfococcus multivorans strain DSM 2059 chromosome, complete genome blastn 576 311 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfococcaceae Desulfococcus Desulfococcus multivorans
5421117 5421117 PRJNA1182301_P_NODE_12965_length_317_cov_3.118852_g12840_i0 PRJNA1182301 12965 317 3.118852 9.88676084 Desulfococcus multivorans 897 Bacteria Bacteria 309 1.6e-79   NTclustered gi|84616844|emb|CT009609.1| 897 g12840 i0 84.227 10.8044164037855 317 50 100 0 1 317 47544 47860 Desulfococcus multivorans vrl island blastn 3425 309 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfococcaceae Desulfococcus Desulfococcus multivorans
5422152 5422152 PRJNA1182301_P_NODE_55825_length_246_cov_1.456647_g55700_i0 PRJNA1182301 55825 246 1.456647 3.58335162 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 146 4.4e-39   NR MEF8942007.1 2683721 g55700 i0 82.9 1 82 14 100 0 1 246 459 540 MEF8942007.1 malto-oligosyltrehalose trehalohydrolase [Desulfohalobiaceae bacterium] diamond 246 146 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
10522477 10522477 PRJNA1182301_P_NODE_44609_length_256_cov_1.683060_g44484_i0 PRJNA1182301 44609 256 1.68306 4.3086336 Candidatus Electronema aureum 2005002 Bacteria Bacteria 254 5.94e-63   NTclustered gi|2322424202|emb|OW818638.1| 2005002 g44484 i0 86.192 214.140625 239 28 93 4 1 237 335 570 Candidatus Electronema aureum isolate ENR-cMAG genome assembly, chromosome: 1 blastn 54820 254 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Candidatus Electronema Candidatus Electronema aureum
15622071 15622071 PRJNA1182301_P_NODE_65733_length_234_cov_2.372671_g65608_i0 PRJNA1182301 65733 234 2.372671 5.55205014 Desulfurivibrio alkaliphilus 427923 Bacteria Bacteria 80.5 9.61e-11   NTclustered gi|296923907|gb|CP001940.1| 589865 g65608 i0 77.07 4.88461538461539 157 25 65 9 20 170 1787833 1787984 Desulfurivibrio alkaliphilus AHT2, complete genome blastn 1143 80.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfurivibrio Desulfurivibrio alkaliphilus
21995217 21995217 PRJNA1182301_P_NODE_3378_length_487_cov_4.398551_g3254_i0 PRJNA1182301 3378 487 4.398551 21.42094337 Pseudodesulfovibrio aespoeensis 182210 Bacteria Bacteria 503 1.09e-137   NTclustered gi|316941978|gb|CP002431.1| 643562 g3254 i0 85.744 27.7104722792608 477 66 98 2 11 486 1834670 1834195 Pseudodesulfovibrio aespoeensis Aspo-2 chromosome, complete genome blastn 13495 503 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Pseudodesulfovibrio Pseudodesulfovibrio aespoeensis
21995439 21995439 PRJNA1182301_P_NODE_43438_length_257_cov_2.516304_g43313_i0 PRJNA1182301 43438 257 2.516304 6.46690128 Desulfococcus multivorans 897 Bacteria Bacteria 438 1.5399999999999995e-118   NTclustered gi|84616844|emb|CT009609.1| 897 g43313 i0 97.647 43.4396887159533 255 6 99 0 1 255 39531 39277 Desulfococcus multivorans vrl island blastn 11164 438 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfococcaceae Desulfococcus Desulfococcus multivorans
24544895 24544895 PRJNA1182301_P_NODE_49460_length_250_cov_2.909605_g49335_i0 PRJNA1182301 49460 250 2.909605 7.2740125 Pseudodesulfovibrio profundus 57320 Bacteria Bacteria 287 5.7e-73   NTclustered gi|1248817418|emb|LT907975.1| 57320 g49335 i0 87.5 24.268 248 31 99 0 3 250 540398 540151 Desulfovibrio profundus strain 500-1 genome assembly, chromosome: DPRO blastn 6067 287 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Pseudodesulfovibrio Pseudodesulfovibrio profundus
26977271 26977271 PRJNA1182301_P_NODE_23202_length_284_cov_2.142180_g23077_i0 PRJNA1182301 23202 284 2.14218 6.0837912 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 44.7 0.0108   NR MCF8029844.1 2683721 g23077 i0 94.7 0.200704225352113 19 1 20.1 0 77 133 219 237 MCF8029844.1 class I SAM-dependent methyltransferase [Desulfohalobiaceae bacterium] diamond 57 44.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
27198438 27198438 PRJNA1182301_P_NODE_18942_length_290_cov_2.101382_g18817_i0 PRJNA1182301 18942 290 2.101382 6.0940078 Desulfobulbaceae bacterium Mzg5 2715680 Bacteria Bacteria 55.5 2.12e-6   NR BCB94842.1 2715680 g18817 i0 42.1 1.78965517241379 76 44 78.6 0 234 7 206 281 BCB94842.1 hypothetical protein MDB5_24640 [Desulfobulbaceae bacterium Mzg5] diamond 519 55.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Thiovibrionaceae Thiovibrio Thiovibrio sp. Mzg5
27293472 27293472 PRJNA1182301_P_NODE_52023_length_249_cov_0.875000_g51898_i0 PRJNA1182301 52023 249 0.875 2.17875 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 102 2.7599999999999995e-23   NR MCF8094271.1 2049433 g51898 i0 86 0.686746987951807 57 8 68.7 0 78 248 1 57 MCF8094271.1 FliI/YscN family ATPase [Desulfobacteraceae bacterium] diamond 171 102 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
28019961 28019961 PRJNA1182301_P_NODE_40845_length_261_cov_1.356383_g40720_i0 PRJNA1182301 40845 261 1.356383 3.54015963 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 169 3.31e-49   NR MEF8943118.1 2683721 g40720 i0 93 0.988505747126437 86 6 98.9 0 2 259 201 286 MEF8943118.1 CaiB/BaiF CoA-transferase family protein [Desulfohalobiaceae bacterium] diamond 258 169 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
28777461 28777461 PRJNA1182301_P_NODE_43987_length_257_cov_1.364130_g43862_i0 PRJNA1182301 43987 257 1.36413 3.5058141 Desulfocurvibacter africanus 873 Bacteria Bacteria 100 3.3e-24   NR WP_027368314.1 873 g43862 i0 58.3 0.980544747081712 84 34 96.9 1 4 252 4 87 WP_027368314.1 NAD(P)H:quinone oxidoreductase [Desulfocurvibacter africanus] diamond 252 100 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfocurvibacter Desulfocurvibacter africanus
29377449 29377449 PRJNA1182301_P_NODE_27349_length_279_cov_1.155340_g27224_i0 PRJNA1182301 27349 279 1.15534 3.2233986 Desulfobacterales bacterium 2044940 Bacteria Bacteria 159 6.53e-45   NR MBS3733039.1 2044940 g27224 i0 88 0.989247311827957 92 11 98.9 0 278 3 170 261 MBS3733039.1 3-deoxy-D-manno-octulosonic acid transferase [Desulfobacterales bacterium] diamond 276 159 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
30249580 30249580 PRJNA1182301_P_NODE_59032_length_244_cov_0.900585_g58907_i0 PRJNA1182301 59032 244 0.900585 2.1974274 Pseudomonadati 3379134 Bacteria Bacteria 87.4 6.84e-18   NR PLX82135.1 892 g58907 i0 51.3 2.82786885245902 78 38 95.9 0 6 239 452 529 PLX82135.1 MAG: chemotaxis protein CheA [Desulfuromonas sp.] diamond 690 87.8 0.995444191343964 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae Desulfuromonas Desulfuromonas sp.
30281374 30281374 PRJNA1182301_P_NODE_67452_length_227_cov_2.746753_g67327_i0 PRJNA1182301 67452 227 2.746753 6.23512931 Pseudomonadati 3379134 Bacteria Bacteria 132 6.419999999999999e-35   NR MBF0228156.1 2006184 g67327 i0 76 2.97356828193833 75 18 99.1 0 3 227 89 163 MBF0228156.1 DUF4910 domain-containing protein [Desulfamplus sp.] diamond 675 133 0.992481203007519 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Desulfamplus Desulfamplus sp.
30313066 30313066 PRJNA1182301_P_NODE_44672_length_256_cov_1.639344_g44547_i0 PRJNA1182301 44672 256 1.639344 4.19672064 Pseudomonadati 3379134 Bacteria Bacteria 52.4 1.76e-5   NR MDD4463256.1 2044940 g44547 i0 41.9 6.09375 62 36 72.7 0 188 3 982 1043 MDD4463256.1 DUF6531 domain-containing protein [Desulfobacterales bacterium] diamond 1560 52.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
30325526 30325526 PRJNA1182301_P_NODE_25092_length_282_cov_1.301435_g24967_i0 PRJNA1182301 25092 282 1.301435 3.6700467 Desulfuromonadaceae bacterium 2099677 Bacteria Bacteria 192 5.7e-57   NR MDY0292808.1 2099677 g24967 i0 98.9 1 94 1 100 0 282 1 216 309 MDY0292808.1 Fic family protein [Desulfuromonadaceae bacterium] diamond 282 192 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae   Desulfuromonadaceae bacterium
30420113 30420113 PRJNA1182301_P_NODE_20893_length_287_cov_3.869159_g20768_i0 PRJNA1182301 20893 287 3.869159 11.10448633 Desulfobulbus propionicus 894 Bacteria Bacteria 58.2 2.07e-7   NR WP_015725103.1 894 g20768 i0 50.8 3.61672473867596 63 28 62.7 2 189 10 20 82 WP_015725103.1 phage protease [Desulfobulbus propionicus] diamond 1038 58.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfobulbus Desulfobulbus propionicus
31102271 31102271 PRJNA1182301_P_NODE_27455_length_278_cov_2.892683_g27330_i0 PRJNA1182301 27455 278 2.892683 8.04165874 Pseudomonadati 3379134 Bacteria Bacteria 184 6.679999999999999e-55   NR MBC7357604.1 2301220 g27330 i0 100 2.97841726618705 92 0 99.3 0 276 1 172 263 MBC7357604.1 hypothetical protein [Desulfacinum sp.] diamond 828 184 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria Syntrophobacterales Syntrophobacteraceae Desulfacinum Desulfacinum sp.
31905486 31905486 PRJNA1182301_P_NODE_66957_length_229_cov_2.801282_g66832_i0 PRJNA1182301 66957 229 2.801282 6.41493578 Desulfovulcanus ferrireducens 2831190 Bacteria Bacteria 40.8 0.0271   NR WP_252380255.1 2831190 g66832 i0 59.4 0.419213973799127 32 13 41.9 0 215 120 27 58 WP_252380255.1 hypothetical protein [Desulfovulcanus ferrireducens] diamond 96 40.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfonauticaceae Desulfovulcanus Desulfovulcanus ferrireducens
32000447 32000447 PRJNA1182301_P_NODE_33378_length_270_cov_2.878173_g33253_i0 PRJNA1182301 33378 270 2.878173 7.7710671 Candidatus Electrothrix sp. LOE2 2302660 Bacteria Bacteria 52.8 1.49e-5   NR MCI5219037.1 2302660 g33253 i0 42.9 2.45555555555556 84 37 87.8 3 32 268 167 244 MCI5219037.1 DUF262 domain-containing protein [Candidatus Electrothrix sp. LOE2] diamond 663 52.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Candidatus Electrothrix Candidatus Electrothrix sp. LOE2
32177980 32177980 PRJNA1182301_P_NODE_63338_length_241_cov_0.916667_g63213_i0 PRJNA1182301 63338 241 0.916667 2.20916747 Pseudomonadati 3379134 Bacteria Bacteria 160 1.05e-45   NR MBC7357604.1 2301220 g63213 i0 98.8 3.98340248962656 80 1 99.6 0 1 240 267 346 MBC7357604.1 hypothetical protein [Desulfacinum sp.] diamond 960 160 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria Syntrophobacterales Syntrophobacteraceae Desulfacinum Desulfacinum sp.
32380273 32380273 PRJNA1182301_P_NODE_58979_length_244_cov_0.900585_g58854_i0 PRJNA1182301 58979 244 0.900585 2.1974274 Desulforhabdus sp. TSK 2925014 Bacteria Bacteria 69.7 1.21e-11   NR WP_244082488.1 2925014 g58854 i0 49.4 1.06967213114754 87 31 95.9 3 234 1 269 351 WP_244082488.1 hypothetical protein [Desulforhabdus sp. TSK] diamond 261 69.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria Syntrophobacterales Syntrophobacteraceae Desulforhabdus Desulforhabdus sp. TSK
32790165 32790165 PRJNA1182301_P_NODE_32060_length_272_cov_2.070352_g31935_i0 PRJNA1182301 32060 272 2.070352 5.63135744 Desulfobacterales bacterium 2044940 Bacteria Bacteria 102 4.019999999999999e-23   NR MDZ7831872.1 2044940 g31935 i0 92.2 0.5625 51 4 56.3 0 270 118 678 728 MDZ7831872.1 malate synthase G [Desulfobacterales bacterium] diamond 153 102 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;