RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1182301", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1182301 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29250988 29250988 PRJNA1182301_P_NODE_34109_length_269_cov_3.535714_g33984_i0 PRJNA1182301 34109 269 3.535714 9.51107066 Paralvinella palmiformis 53620 Annelida Annelida 60.5 2.75e-8   NR KAK2141589.1 53620 g33984 i0 60.5 0.479553903345725 43 17 48 0 172 44 143 185 KAK2141589.1 hypothetical protein LSH36_1073g00035 [Paralvinella palmiformis] diamond 129 60.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
31007643 31007643 PRJNA1182301_P_NODE_48434_length_251_cov_1.730337_g48309_i0 PRJNA1182301 48434 251 1.730337 4.34314587 Metazoa 33208 Annelida Annelida 55.8 9.69e-7   NR CAH1777544.1 6347 g48309 i0 63.3 2.52191235059761 30 11 35.9 0 250 161 461 490 CAH1777544.1 unnamed protein product, partial [Owenia fusiformis] diamond 633 55.8 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;