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contig_metadata

7 rows where bioproject = "PRJNA1180292" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1180292 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26901686 26901686 PRJNA1180292_P_NODE_10481_length_247_cov_0.896552_g10349_i0 PRJNA1180292 10481 247 0.896552 2.21448344 Bacteria 2 Bacteria Bacteria 60.1 2.28e-9   NR OGU77045.1 1798433 g10349 i0 65.8 1.38461538461538 38 13 46.2 0 132 245 1 38 OGU77045.1 MAG: cupin [Ignavibacteria bacterium RBG_16_34_14] diamond 342 60.5 0.993388429752066 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium RBG_16_34_14
27249378 27249378 PRJNA1180292_P_NODE_12723_length_243_cov_0.917647_g12591_i0 PRJNA1180292 12723 243 0.917647 2.22988221 Pseudomonadati 3379134 Bacteria Bacteria 63.2 1.92e-10   NR MBL8007518.1 2053306 g12591 i0 52.3 3.87654320987654 65 31 80.2 0 42 236 52 116 MBL8007518.1 low affinity iron permease family protein [Ignavibacteria bacterium] diamond 942 63.5 0.995275590551181 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
27798920 27798920 PRJNA1180292_P_NODE_12704_length_243_cov_0.917647_g12572_i0 PRJNA1180292 12704 243 0.917647 2.22988221 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 65.9 6.71e-11   NR MBI3110507.1 2049428 g12572 i0 46.2 0.962962962962963 78 39 96.3 1 10 243 85 159 MBI3110507.1 hypothetical protein [Ignavibacteriales bacterium] diamond 234 65.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
27849291 27849291 PRJNA1180292_P_NODE_12724_length_243_cov_0.911765_g12592_i0 PRJNA1180292 12724 243 0.911765 2.21558895 Bacteria 2 Bacteria Bacteria 135 8.989999999999998e-35   NR MBK7381136.1 2049428 g12592 i0 78.8 1.97530864197531 80 17 98.8 0 241 2 140 219 MBK7381136.1 N-6 DNA methylase [Ignavibacteriales bacterium] diamond 480 135 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
28177389 28177389 PRJNA1180292_P_NODE_10866_length_247_cov_0.896552_g10734_i0 PRJNA1180292 10866 247 0.896552 2.21448344 Ignavibacteria bacterium 2053306 Bacteria Bacteria 151 1.29e-40   NR MBK6504801.1 2053306 g10734 i0 86.6 0.995951417004049 82 11 99.6 0 247 2 334 415 MBK6504801.1 dehydrogenase E1 component subunit alpha/beta [Ignavibacteria bacterium] diamond 246 151 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
28872201 28872201 PRJNA1180292_P_NODE_9348_length_250_cov_0.881356_g9216_i0 PRJNA1180292 9348 250 0.881356 2.20339 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 140 6.64e-37   NR RJP72296.1 2049428 g9216 i0 77.1 0.996 83 19 99.6 0 249 1 468 550 RJP72296.1 MAG: hypothetical protein C4539_03835 [Ignavibacteriales bacterium] diamond 249 140 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
29535310 29535310 PRJNA1180292_P_NODE_11170_length_246_cov_0.901734_g11038_i0 PRJNA1180292 11170 246 0.901734 2.21826564 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 142 1.8999999999999995e-38   NR HLG32364.1 2651163 g11038 i0 88.9 0.98780487804878 81 9 98.8 0 3 245 308 388 HLG32364.1 TolC family protein [Ignavibacteriaceae bacterium] diamond 243 142 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;