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contig_metadata

31 rows where bioproject = "PRJNA1180292" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 31 ✖

bioproject 1

  • PRJNA1180292 · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6144071 6144071 PRJNA1180292_P_NODE_10865_length_247_cov_0.896552_g10733_i0 PRJNA1180292 10865 247 0.896552 2.21448344 Methanomicrobiales archaeon 2184052 Archaea Archaea 99.4 1.22e-22   NR MDD1652628.1 2184052 g10733 i0 94.3 0.643724696356275 53 3 64.4 0 159 1 187 239 MDD1652628.1 ABC transporter ATP-binding protein [Methanomicrobiales archaeon] diamond 159 99.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon
7419109 7419109 PRJNA1180292_P_NODE_8546_length_252_cov_0.871508_g8414_i0 PRJNA1180292 8546 252 0.871508 2.19620016 Euryarchaeota archaeon RBG_19FT_COMBO_56_21 1797983 Archaea Archaea 142 2.11e-39   NR OGS57183.1 1797983 g8414 i0 81.9 0.988095238095238 83 15 98.8 0 250 2 83 165 OGS57183.1 MAG: hypothetical protein A3K60_05765 [Euryarchaeota archaeon RBG_19FT_COMBO_56_21] diamond 249 142 1 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon RBG_19FT_COMBO_56_21
7971056 7971056 PRJNA1180292_P_NODE_10107_length_248_cov_0.891429_g9975_i0 PRJNA1180292 10107 248 0.891429 2.21074392 Methanolobus sediminis 3072978 Archaea Archaea 353 5.49e-93   NTclustered gi|2575181144|gb|CP133592.1| 3072978 g9975 i0 92.653 0.987903225806452 245 18 99 0 1 245 1669867 1670111 Methanolobus sediminis strain FTZ6 chromosome, complete genome blastn 245 353 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus sediminis
14346847 14346847 PRJNA1180292_P_NODE_10252_length_248_cov_0.891429_g10120_i0 PRJNA1180292 10252 248 0.891429 2.21074392 Thermoplasmatota archaeon 2806419 Archaea Archaea 137 2.9e-38   NR MBN1389082.1 2806419 g10120 i0 82.9 2.9758064516129 82 14 99.2 0 246 1 81 162 MBN1389082.1 ABC transporter ATP-binding protein [Thermoplasmatota archaeon] diamond 738 137 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
15620600 15620600 PRJNA1180292_P_NODE_10693_length_247_cov_0.896552_g10561_i0 PRJNA1180292 10693 247 0.896552 2.21448344 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 106 4.57e-25   NR HWR96992.1 2032688 g10561 i0 58.5 0.995951417004049 82 34 99.6 0 1 246 279 360 HWR96992.1 hypothetical protein [Candidatus Methanoperedens sp.] diamond 246 106 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
15620610 15620610 PRJNA1180292_P_NODE_11693_length_245_cov_0.906977_g11561_i0 PRJNA1180292 11693 245 0.906977 2.22209365 Methanoregula sp. 2052170 Archaea Archaea 187 5.809999999999998e-43   NTclustered gi|2381065543|gb|CP112999.1| 2052170 g11561 i0 82.273 0.897959183673469 220 35 89 2 28 245 1234947 1235164 MAG: Methanoregula sp. isolate DGG0 chromosome, complete genome blastn 220 187 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
19443801 19443801 PRJNA1180292_P_NODE_10636_length_247_cov_0.896552_g10504_i0 PRJNA1180292 10636 247 0.896552 2.21448344 Thermoplasmata archaeon 1906666 Archaea Archaea 149 3.369999999999999e-42   NR HEX7392766.1 1906666 g10504 i0 89 0.995951417004049 82 9 99.6 0 1 246 108 189 HEX7392766.1 FAD-dependent oxidoreductase [Thermoplasmata archaeon] diamond 246 149 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
26597094 26597094 PRJNA1180292_P_NODE_11681_length_245_cov_0.906977_g11549_i0 PRJNA1180292 11681 245 0.906977 2.22209365 Methanoregulaceae archaeon 2485498 Archaea Archaea 102 2.2899999999999998e-23   NR MBP7716362.1 2485498 g11549 i0 85.2 2.24081632653061 61 9 74.7 0 62 244 1 61 MBP7716362.1 aspartate kinase [Methanoregulaceae archaeon] diamond 549 102 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon
26755493 26755493 PRJNA1180292_P_NODE_12921_length_242_cov_0.923077_g12789_i0 PRJNA1180292 12921 242 0.923077 2.23384634 Methanothrix sp. 90426 Archaea Archaea 147 7.889999999999998e-42   NR NTV76868.1 90426 g12789 i0 95 3.96694214876033 80 4 99.2 0 1 240 105 184 NTV76868.1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase [Methanothrix sp.] diamond 960 147 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
27230206 27230206 PRJNA1180292_P_NODE_9723_length_249_cov_0.886364_g9591_i0 PRJNA1180292 9723 249 0.886364 2.20704636 Methanoregula sp. 2052170 Archaea Archaea 166 1.48e-46   NR MCX6684757.1 2052170 g9591 i0 96.3 2.96385542168675 82 3 98.8 0 248 3 463 544 MCX6684757.1 beta-CASP ribonuclease aCPSF1 [Methanoregula sp.] diamond 738 166 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
27767400 27767400 PRJNA1180292_P_NODE_10124_length_248_cov_0.891429_g9992_i0 PRJNA1180292 10124 248 0.891429 2.21074392 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 84 1.03e-16   NR HWR98730.1 2032688 g9992 i0 81.5 0.653225806451613 54 10 65.3 0 164 3 1 54 HWR98730.1 hypothetical protein [Candidatus Methanoperedens sp.] diamond 162 84 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
27798927 27798927 PRJNA1180292_P_NODE_7884_length_253_cov_0.866667_g7752_i0 PRJNA1180292 7884 253 0.866667 2.19266751 Methanothrix sp. 90426 Archaea Archaea 128 2e-34   NR MDD1741511.1 90426 g7752 i0 90.5 3.72332015810277 74 7 87.7 0 224 3 1 74 MDD1741511.1 ABC transporter permease [Methanothrix sp.] diamond 942 128 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
28114346 28114346 PRJNA1180292_P_NODE_12625_length_243_cov_0.917647_g12493_i0 PRJNA1180292 12625 243 0.917647 2.22988221 Thermoplasmatales archaeon 2268204 Archaea Archaea 96.7 7.95e-22   NR MBP1662732.1 2268204 g12493 i0 87.9 0.716049382716049 58 7 71.6 0 65 238 1 58 MBP1662732.1 uncharacterized protein [Thermoplasmatales archaeon] diamond 174 96.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
28398650 28398650 PRJNA1180292_P_NODE_8506_length_252_cov_0.871508_g8374_i0 PRJNA1180292 8506 252 0.871508 2.19620016 Methanothrix sp. 90426 Archaea Archaea 151 2.31e-42   NR MDM7940585.1 90426 g8374 i0 94 0.988095238095238 83 5 98.8 0 251 3 126 208 MDM7940585.1 cysteine desulfurase family protein [Methanothrix sp.] diamond 249 151 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
28575597 28575597 PRJNA1180292_P_NODE_12627_length_243_cov_0.917647_g12495_i0 PRJNA1180292 12627 243 0.917647 2.22988221 Archaea 2157 Archaea Archaea 151 2.59e-40   NR MBP1661960.1 2268204 g12495 i0 93.8 2.96296296296296 80 5 98.8 0 2 241 421 500 MBP1661960.1 Acetyl-CoA synthetase [Thermoplasmatales archaeon] diamond 720 152 0.993421052631579 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
28796473 28796473 PRJNA1180292_P_NODE_12147_length_244_cov_0.912281_g12015_i0 PRJNA1180292 12147 244 0.912281 2.22596564 Methanothrix 2222 Archaea Archaea 150 3.5199999999999998e-43   NR MCK9566064.1 90426 g12015 i0 87.7 10.9549180327869 81 10 99.6 0 244 2 118 198 MCK9566064.1 MTAP family purine nucleoside phosphorylase [Methanothrix sp.] diamond 2673 150 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
28840595 28840595 PRJNA1180292_P_NODE_10348_length_248_cov_0.891429_g10216_i0 PRJNA1180292 10348 248 0.891429 2.21074392 Methanomicrobiales archaeon 2184052 Archaea Archaea 90.5 3.64e-19   NR MDD1670830.1 2184052 g10216 i0 66.7 1.82661290322581 75 25 90.7 0 239 15 213 287 MDD1670830.1 threonine ammonia-lyase [Methanomicrobiales archaeon] diamond 453 90.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon
30186044 30186044 PRJNA1180292_P_NODE_10532_length_247_cov_0.896552_g10400_i0 PRJNA1180292 10532 247 0.896552 2.21448344 Archaea 2157 Archaea Archaea 119 1.4e-31   NR OPX66778.1 1811720 g10400 i0 66.7 4.89473684210526 81 27 98.4 0 247 5 115 195 OPX66778.1 MAG: hypothetical protein A4E36_01865 [Methanoregulaceae archaeon PtaB.Bin009] diamond 1209 120 0.991666666666667 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon PtaB.Bin009
30198355 30198355 PRJNA1180292_P_NODE_9852_length_249_cov_0.886364_g9720_i0 PRJNA1180292 9852 249 0.886364 2.20704636 Thermoplasmata archaeon 1906666 Archaea Archaea 112 6.760000000000001e-27   NR HEX7392324.1 1906666 g9720 i0 87.7 0.686746987951807 57 7 68.7 0 246 76 395 451 HEX7392324.1 aspartate aminotransferase family protein [Thermoplasmata archaeon] diamond 171 112 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30376155 30376155 PRJNA1180292_P_NODE_6252_length_281_cov_1.125000_g6120_i0 PRJNA1180292 6252 281 1.125 3.16125 Methanobacterium 2160 Archaea Archaea 165 1.61e-48   NR WP_048079924.1 2160 g6120 i0 89.9 1.90035587188612 89 9 95 0 1 267 191 279 WP_048079924.1 MULTISPECIES: ATP-binding cassette domain-containing protein [Methanobacterium] diamond 534 166 0.993975903614458 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium  
30420104 30420104 PRJNA1180292_P_NODE_7953_length_253_cov_0.866667_g7821_i0 PRJNA1180292 7953 253 0.866667 2.19266751 Euryarchaeota archaeon RBG_13_31_8 1797976 Archaea Archaea 133 3.85e-35   NR OGS41013.1 1797976 g7821 i0 78.6 0.99604743083004 84 18 99.6 0 2 253 281 364 OGS41013.1 MAG: GTPase HflX [Euryarchaeota archaeon RBG_13_31_8] diamond 252 133 1 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon RBG_13_31_8
31146016 31146016 PRJNA1180292_P_NODE_8095_length_253_cov_0.866667_g7963_i0 PRJNA1180292 8095 253 0.866667 2.19266751 Euryarchaeota archaeon ADurb.Bin19 2026739 Archaea Archaea 145 2.8499999999999993e-42   NR OQB20206.1 1852877 g7963 i0 89.3 1.99209486166008 84 9 99.6 0 253 2 88 171 OQB20206.1 MAG: putative inner membrane protein [Euryarchaeota archaeon ADurb.Bin190] diamond 504 145 1 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon ADurb.Bin190
31241142 31241142 PRJNA1180292_P_NODE_7755_length_253_cov_1.644444_g7623_i0 PRJNA1180292 7755 253 1.644444 4.16044332 Methanobacterium sp. 2164 Archaea Archaea 154 1.75e-41   NR MBI5680205.1 2164 g7623 i0 94 0.984189723320158 83 5 98.4 0 3 251 469 551 MBI5680205.1 hydrogenase iron-sulfur subunit [Methanobacterium sp.] diamond 249 154 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
31671533 31671533 PRJNA1180292_P_NODE_12857_length_242_cov_0.923077_g12725_i0 PRJNA1180292 12857 242 0.923077 2.23384634 root 1 Root_unresolved Root_unresolved 105 1.12e-24   NR WP_343089241.1 1262400 g12725 i0 69.2 4.89669421487603 78 24 96.7 0 234 1 206 283 WP_343089241.1 DNA polymerase [Methanocalculus natronophilus] diamond 1185 105 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocalculaceae Methanocalculus Methanocalculus natronophilus
31747272 31747272 PRJNA1180292_P_NODE_8277_length_252_cov_0.871508_g8145_i0 PRJNA1180292 8277 252 0.871508 2.19620016 Methanobacteriota archaeon 2026739 Archaea Archaea 154 3.6699999999999996e-42   NR MCH7660566.1 2026739 g8145 i0 88.1 1 84 10 100 0 1 252 329 412 MCH7660566.1 hypothetical protein [Methanobacteriota archaeon] diamond 252 154 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31842082 31842082 PRJNA1180292_P_NODE_9997_length_249_cov_0.869318_g9865_i0 PRJNA1180292 9997 249 0.869318 2.16460182 Thermoplasmata archaeon 1906666 Archaea Archaea 138 7.780000000000001e-36   NR HIG99815.1 1906666 g9865 i0 79.3 0.987951807228916 82 17 98.8 0 247 2 35 116 HIG99815.1 hypothetical protein [Thermoplasmata archaeon] diamond 246 138 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
32095332 32095332 PRJNA1180292_P_NODE_10138_length_248_cov_0.891429_g10006_i0 PRJNA1180292 10138 248 0.891429 2.21074392 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 158 1.0599999999999999e-42   NR HWR98489.1 2032688 g10006 i0 92.7 0.991935483870968 82 6 99.2 0 2 247 652 733 HWR98489.1 ATP-binding protein [Candidatus Methanoperedens sp.] diamond 246 158 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
32380244 32380244 PRJNA1180292_P_NODE_12719_length_243_cov_0.917647_g12587_i0 PRJNA1180292 12719 243 0.917647 2.22988221 Thermoplasmatota archaeon 2806419 Archaea Archaea 157 1.35e-47   NR MEW5747852.1 2806419 g12587 i0 93.8 3.95061728395062 80 5 98.8 0 2 241 18 97 MEW5747852.1 4Fe-4S binding protein [Thermoplasmatota archaeon] diamond 960 157 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
32380255 32380255 PRJNA1180292_P_NODE_9819_length_249_cov_0.886364_g9687_i0 PRJNA1180292 9819 249 0.886364 2.20704636 Thermoplasmata archaeon 1906666 Archaea Archaea 151 2.9e-41   NR MCU0853309.1 1906666 g9687 i0 85.4 0.987951807228916 82 12 98.8 0 2 247 312 393 MCU0853309.1 hypothetical protein [Thermoplasmata archaeon] diamond 246 151 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
32651731 32651731 PRJNA1180292_P_NODE_7860_length_253_cov_0.866667_g7728_i0 PRJNA1180292 7860 253 0.866667 2.19266751 Methanobacteriati 3366610 Archaea Archaea 98.6 4.73e-22   NR RLG29126.1 2250255 g7728 i0 59.8 5.85770750988142 82 32 97.2 1 3 248 287 367 RLG29126.1 MAG: hypothetical protein DRN98_08700 [Methanosarcinales archaeon] diamond 1482 98.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
32651732 32651732 PRJNA1180292_P_NODE_8100_length_253_cov_0.866667_g7968_i0 PRJNA1180292 8100 253 0.866667 2.19266751 root 1 Root_unresolved Root_unresolved 150 7.149999999999998e-42   NR WP_048159054.1 1434103 g7968 i0 81 7.89723320158103 84 16 99.6 0 1 252 154 237 WP_048159054.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Methanosarcina sp. WWM596] diamond 1998 150 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp. WWM596

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;