contig_metadata
17 rows where bioproject = "PRJNA1180292" and tax_clade = "Stenosarchaea group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6144071 | 6144071 | PRJNA1180292_P_NODE_10865_length_247_cov_0.896552_g10733_i0 | PRJNA1180292 | 10865 | 247 | 0.896552 | 2.21448344 | Methanomicrobiales archaeon | 2184052 | Archaea | Archaea | 99.4 | 1.22e-22 | NR | MDD1652628.1 | 2184052 | g10733 | i0 | 94.3 | 0.643724696356275 | 53 | 3 | 64.4 | 0 | 159 | 1 | 187 | 239 | MDD1652628.1 ABC transporter ATP-binding protein [Methanomicrobiales archaeon] | diamond | 159 | 99.4 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanomicrobiales | Methanomicrobiales archaeon | |||
| 7971056 | 7971056 | PRJNA1180292_P_NODE_10107_length_248_cov_0.891429_g9975_i0 | PRJNA1180292 | 10107 | 248 | 0.891429 | 2.21074392 | Methanolobus sediminis | 3072978 | Archaea | Archaea | 353 | 5.49e-93 | NTclustered | gi|2575181144|gb|CP133592.1| | 3072978 | g9975 | i0 | 92.653 | 0.987903225806452 | 245 | 18 | 99 | 0 | 1 | 245 | 1669867 | 1670111 | Methanolobus sediminis strain FTZ6 chromosome, complete genome | blastn | 245 | 353 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanosarcinales | Methanosarcinaceae | Methanolobus | Methanolobus sediminis | |
| 15620600 | 15620600 | PRJNA1180292_P_NODE_10693_length_247_cov_0.896552_g10561_i0 | PRJNA1180292 | 10693 | 247 | 0.896552 | 2.21448344 | Candidatus Methanoperedens sp. | 2032688 | Archaea | Archaea | 106 | 4.57e-25 | NR | HWR96992.1 | 2032688 | g10561 | i0 | 58.5 | 0.995951417004049 | 82 | 34 | 99.6 | 0 | 1 | 246 | 279 | 360 | HWR96992.1 hypothetical protein [Candidatus Methanoperedens sp.] | diamond | 246 | 106 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanosarcinales | Candidatus Methanoperedentaceae | Candidatus Methanoperedens | Candidatus Methanoperedens sp. | |
| 15620610 | 15620610 | PRJNA1180292_P_NODE_11693_length_245_cov_0.906977_g11561_i0 | PRJNA1180292 | 11693 | 245 | 0.906977 | 2.22209365 | Methanoregula sp. | 2052170 | Archaea | Archaea | 187 | 5.809999999999998e-43 | NTclustered | gi|2381065543|gb|CP112999.1| | 2052170 | g11561 | i0 | 82.273 | 0.897959183673469 | 220 | 35 | 89 | 2 | 28 | 245 | 1234947 | 1235164 | MAG: Methanoregula sp. isolate DGG0 chromosome, complete genome | blastn | 220 | 187 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanomicrobiales | Methanoregulaceae | Methanoregula | Methanoregula sp. | |
| 26597094 | 26597094 | PRJNA1180292_P_NODE_11681_length_245_cov_0.906977_g11549_i0 | PRJNA1180292 | 11681 | 245 | 0.906977 | 2.22209365 | Methanoregulaceae archaeon | 2485498 | Archaea | Archaea | 102 | 2.2899999999999998e-23 | NR | MBP7716362.1 | 2485498 | g11549 | i0 | 85.2 | 2.24081632653061 | 61 | 9 | 74.7 | 0 | 62 | 244 | 1 | 61 | MBP7716362.1 aspartate kinase [Methanoregulaceae archaeon] | diamond | 549 | 102 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanomicrobiales | Methanoregulaceae | Methanoregulaceae archaeon | ||
| 26755493 | 26755493 | PRJNA1180292_P_NODE_12921_length_242_cov_0.923077_g12789_i0 | PRJNA1180292 | 12921 | 242 | 0.923077 | 2.23384634 | Methanothrix sp. | 90426 | Archaea | Archaea | 147 | 7.889999999999998e-42 | NR | NTV76868.1 | 90426 | g12789 | i0 | 95 | 3.96694214876033 | 80 | 4 | 99.2 | 0 | 1 | 240 | 105 | 184 | NTV76868.1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase [Methanothrix sp.] | diamond | 960 | 147 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanotrichales | Methanotrichaceae | Methanothrix | Methanothrix sp. | |
| 27230206 | 27230206 | PRJNA1180292_P_NODE_9723_length_249_cov_0.886364_g9591_i0 | PRJNA1180292 | 9723 | 249 | 0.886364 | 2.20704636 | Methanoregula sp. | 2052170 | Archaea | Archaea | 166 | 1.48e-46 | NR | MCX6684757.1 | 2052170 | g9591 | i0 | 96.3 | 2.96385542168675 | 82 | 3 | 98.8 | 0 | 248 | 3 | 463 | 544 | MCX6684757.1 beta-CASP ribonuclease aCPSF1 [Methanoregula sp.] | diamond | 738 | 166 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanomicrobiales | Methanoregulaceae | Methanoregula | Methanoregula sp. | |
| 27767400 | 27767400 | PRJNA1180292_P_NODE_10124_length_248_cov_0.891429_g9992_i0 | PRJNA1180292 | 10124 | 248 | 0.891429 | 2.21074392 | Candidatus Methanoperedens sp. | 2032688 | Archaea | Archaea | 84 | 1.03e-16 | NR | HWR98730.1 | 2032688 | g9992 | i0 | 81.5 | 0.653225806451613 | 54 | 10 | 65.3 | 0 | 164 | 3 | 1 | 54 | HWR98730.1 hypothetical protein [Candidatus Methanoperedens sp.] | diamond | 162 | 84 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanosarcinales | Candidatus Methanoperedentaceae | Candidatus Methanoperedens | Candidatus Methanoperedens sp. | |
| 27798927 | 27798927 | PRJNA1180292_P_NODE_7884_length_253_cov_0.866667_g7752_i0 | PRJNA1180292 | 7884 | 253 | 0.866667 | 2.19266751 | Methanothrix sp. | 90426 | Archaea | Archaea | 128 | 2e-34 | NR | MDD1741511.1 | 90426 | g7752 | i0 | 90.5 | 3.72332015810277 | 74 | 7 | 87.7 | 0 | 224 | 3 | 1 | 74 | MDD1741511.1 ABC transporter permease [Methanothrix sp.] | diamond | 942 | 128 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanotrichales | Methanotrichaceae | Methanothrix | Methanothrix sp. | |
| 28398650 | 28398650 | PRJNA1180292_P_NODE_8506_length_252_cov_0.871508_g8374_i0 | PRJNA1180292 | 8506 | 252 | 0.871508 | 2.19620016 | Methanothrix sp. | 90426 | Archaea | Archaea | 151 | 2.31e-42 | NR | MDM7940585.1 | 90426 | g8374 | i0 | 94 | 0.988095238095238 | 83 | 5 | 98.8 | 0 | 251 | 3 | 126 | 208 | MDM7940585.1 cysteine desulfurase family protein [Methanothrix sp.] | diamond | 249 | 151 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanotrichales | Methanotrichaceae | Methanothrix | Methanothrix sp. | |
| 28796473 | 28796473 | PRJNA1180292_P_NODE_12147_length_244_cov_0.912281_g12015_i0 | PRJNA1180292 | 12147 | 244 | 0.912281 | 2.22596564 | Methanothrix | 2222 | Archaea | Archaea | 150 | 3.5199999999999998e-43 | NR | MCK9566064.1 | 90426 | g12015 | i0 | 87.7 | 10.9549180327869 | 81 | 10 | 99.6 | 0 | 244 | 2 | 118 | 198 | MCK9566064.1 MTAP family purine nucleoside phosphorylase [Methanothrix sp.] | diamond | 2673 | 150 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanotrichales | Methanotrichaceae | Methanothrix | Methanothrix sp. | |
| 28840595 | 28840595 | PRJNA1180292_P_NODE_10348_length_248_cov_0.891429_g10216_i0 | PRJNA1180292 | 10348 | 248 | 0.891429 | 2.21074392 | Methanomicrobiales archaeon | 2184052 | Archaea | Archaea | 90.5 | 3.64e-19 | NR | MDD1670830.1 | 2184052 | g10216 | i0 | 66.7 | 1.82661290322581 | 75 | 25 | 90.7 | 0 | 239 | 15 | 213 | 287 | MDD1670830.1 threonine ammonia-lyase [Methanomicrobiales archaeon] | diamond | 453 | 90.5 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanomicrobiales | Methanomicrobiales archaeon | |||
| 30186044 | 30186044 | PRJNA1180292_P_NODE_10532_length_247_cov_0.896552_g10400_i0 | PRJNA1180292 | 10532 | 247 | 0.896552 | 2.21448344 | Archaea | 2157 | Archaea | Archaea | 119 | 1.4e-31 | NR | OPX66778.1 | 1811720 | g10400 | i0 | 66.7 | 4.89473684210526 | 81 | 27 | 98.4 | 0 | 247 | 5 | 115 | 195 | OPX66778.1 MAG: hypothetical protein A4E36_01865 [Methanoregulaceae archaeon PtaB.Bin009] | diamond | 1209 | 120 | 0.991666666666667 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanomicrobiales | Methanoregulaceae | Methanoregulaceae archaeon PtaB.Bin009 | ||
| 31671533 | 31671533 | PRJNA1180292_P_NODE_12857_length_242_cov_0.923077_g12725_i0 | PRJNA1180292 | 12857 | 242 | 0.923077 | 2.23384634 | root | 1 | Root_unresolved | Root_unresolved | 105 | 1.12e-24 | NR | WP_343089241.1 | 1262400 | g12725 | i0 | 69.2 | 4.89669421487603 | 78 | 24 | 96.7 | 0 | 234 | 1 | 206 | 283 | WP_343089241.1 DNA polymerase [Methanocalculus natronophilus] | diamond | 1185 | 105 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanomicrobiales | Methanocalculaceae | Methanocalculus | Methanocalculus natronophilus | |
| 32095332 | 32095332 | PRJNA1180292_P_NODE_10138_length_248_cov_0.891429_g10006_i0 | PRJNA1180292 | 10138 | 248 | 0.891429 | 2.21074392 | Candidatus Methanoperedens sp. | 2032688 | Archaea | Archaea | 158 | 1.0599999999999999e-42 | NR | HWR98489.1 | 2032688 | g10006 | i0 | 92.7 | 0.991935483870968 | 82 | 6 | 99.2 | 0 | 2 | 247 | 652 | 733 | HWR98489.1 ATP-binding protein [Candidatus Methanoperedens sp.] | diamond | 246 | 158 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanosarcinales | Candidatus Methanoperedentaceae | Candidatus Methanoperedens | Candidatus Methanoperedens sp. | |
| 32651731 | 32651731 | PRJNA1180292_P_NODE_7860_length_253_cov_0.866667_g7728_i0 | PRJNA1180292 | 7860 | 253 | 0.866667 | 2.19266751 | Methanobacteriati | 3366610 | Archaea | Archaea | 98.6 | 4.73e-22 | NR | RLG29126.1 | 2250255 | g7728 | i0 | 59.8 | 5.85770750988142 | 82 | 32 | 97.2 | 1 | 3 | 248 | 287 | 367 | RLG29126.1 MAG: hypothetical protein DRN98_08700 [Methanosarcinales archaeon] | diamond | 1482 | 98.6 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanosarcinales | Methanosarcinales archaeon | |||
| 32651732 | 32651732 | PRJNA1180292_P_NODE_8100_length_253_cov_0.866667_g7968_i0 | PRJNA1180292 | 8100 | 253 | 0.866667 | 2.19266751 | root | 1 | Root_unresolved | Root_unresolved | 150 | 7.149999999999998e-42 | NR | WP_048159054.1 | 1434103 | g7968 | i0 | 81 | 7.89723320158103 | 84 | 16 | 99.6 | 0 | 1 | 252 | 154 | 237 | WP_048159054.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Methanosarcina sp. WWM596] | diamond | 1998 | 150 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanosarcinales | Methanosarcinaceae | Methanosarcina | Methanosarcina sp. WWM596 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;